RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ATP5F1P24539 256 aaPredicted RBP11.19□□□□□ -0.62
HPS4-212ENST00000481910 ACP1P24666 158 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 ACADVLP49748 655 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 ALDH18A1P54886 795 aaKnown RBP11.19□□□□□ -0.62
HPS4-212ENST00000481910 GPLD1P80108 840 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 TAP2Q03519 686 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 PRKAA1Q13131 559 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 NDUFA5Q16718 116 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 ZXDCQ2QGD7 858 aaPredicted RBP11.19□□□□□ -0.62
HPS4-212ENST00000481910 PTCHD3Q3KNS1 767 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 NDUFAF5Q5TEU4 345 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 NKAIN2Q5VXU1 208 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 ARMC6Q6NXE6 501 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 SPRED1Q7Z699 444 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 OOSP2Q86WS3 158 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 ADGRF3Q8IZF5 1079 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 PTGR2Q8N8N7 351 aaPredicted RBP11.19□□□□□ -0.62
HPS4-212ENST00000481910 LINC01555Q8NAE3 123 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 SMPDL3AQ92484 453 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 PYCR2Q96C36 320 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 SLC32A1Q9H598 525 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
HPS4-212ENST00000481910 TBCCD1Q9NVR7 557 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 NKIRAS1Q9NYS0 192 aa11.19□□□□□ -0.62
HPS4-212ENST00000481910 IGHV1OR21-1A0A087WYE8 117 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 PIPSLA2A3N6 862 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 GSAPA4D1B5 854 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 A8MT66 165 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 ISM1B1AKI9 464 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 ANKRD65E5RJM6 399 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 IPO13O94829 963 aaKnown RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 PROS1P07225 676 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 CHRM5P08912 532 aaPredicted RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 POLR2CP19387 275 aaPredicted RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 GGT5P36269 586 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 GDF5P43026 501 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 ETV4P43268 484 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 HSPA7P48741 367 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 AGTR2P50052 363 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 SLC18A1P54219 525 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 BNIP1Q12981 228 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 ELOAQ14241 798 aaKnown RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 TRIP6Q15654 476 aaKnown RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 CCDC157Q569K6 752 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 CAPN13Q6MZZ7 669 aaPredicted RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 ZYG11AQ6WRX3 759 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 USP53Q70EK8 1073 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 RAB44Q7Z6P3 723 aaPredicted RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 SLC22A9Q8IVM8 553 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 GOLM1Q8NBJ4 401 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 HMGCLL1Q8TB92 370 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 NCSTNQ92542 709 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 RSC1A1Q92681 617 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 CCDC126Q96EE4 140 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 MLXIPLQ9NP71 852 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 CCDC177Q9NQR7 707 aaPredicted RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 INTS7Q9NVH2 962 aaKnown RBP11.18□□□□□ -0.62
HPS4-212ENST00000481910 C15orf41Q9Y2V0 281 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 WDR87Q6ZQQ6 2873 aa11.18□□□□□ -0.62
HPS4-212ENST00000481910 OR5K3A6NET4 321 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 H3BQF6 201 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 DUX1O43812 170 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 CCNT2O60583 730 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 STK16O75716 305 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 RPLP0P05388 317 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 GP1BAP07359 652 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 SFTPCP11686 197 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 CCND1P24385 295 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 CD1CP29017 333 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 TBPL1P62380 186 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 PPP2R2AP63151 447 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 CCL7P80098 99 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 MRPS35P82673 323 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 LRRC56Q8IYG6 542 aaPredicted RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 DEFB124Q8NES8 71 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 OR56A3Q8NH54 315 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 PRR7Q8TB68 274 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 MGARPQ8TDB4 240 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 WDR60Q8WVS4 1066 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 SLC22A18Q96BI1 424 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 MOGAT1Q96PD6 335 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 TMEM79Q9BSE2 394 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 ACAT2Q9BWD1 397 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 CD244Q9BZW8 370 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 EPB41L1Q9H4G0 881 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 OXSMQ9NWU1 459 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 SPHK1Q9NYA1 384 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 SLC22A14Q9Y267 594 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 TNPO3Q9Y5L0 923 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 ENTPD2Q9Y5L3 495 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 GVINP1Q7Z2Y8 2422 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 C2orf74A8MZ97 194 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 STX16-NPEPL1H3BU86 382 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 STX16O14662 325 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 CASC3O15234 703 aaKnown RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 WDR47O94967 919 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 SIX3O95343 332 aaPredicted RBP11.17□□□□□ -0.62
HPS4-212ENST00000481910 PAHP00439 452 aa11.17□□□□□ -0.62
HPS4-212ENST00000481910 NR1D1P20393 614 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms