RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 FOXL2P58012 376 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 TBPL1P62380 186 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 OCA2Q04671 838 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 ILF2Q12905 390 aaKnown RBP14.32□□□□□ -0.12
TDP2-205ENST00000480495 MYBPC3Q14896 1274 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 VWA5B1Q5TIE3 1220 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 PRAMEF13Q5VWM6 474 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 AGTRAPQ6RW13 159 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 GALNT16Q8N428 558 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 METTL27Q8N6F8 245 aaPredicted RBP14.32□□□□□ -0.12
TDP2-205ENST00000480495 FBXO36Q8NEA4 188 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 SPATA4Q8NEY3 305 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 COL26A1Q96A83 441 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 HIST1H2AHQ96KK5 128 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 HIST1H2AJQ99878 128 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 ERP44Q9BS26 406 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 H2AFJQ9BTM1 129 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 ATP13A2Q9NQ11 1180 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 CUEDC1Q9NWM3 386 aaPredicted RBP14.32□□□□□ -0.12
TDP2-205ENST00000480495 NSMCE4AQ9NXX6 385 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 MOCS1Q9NZB8 636 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 CTSFQ9UBX1 484 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 ZNF282Q9UDV7 671 aaPredicted RBP14.32□□□□□ -0.12
TDP2-205ENST00000480495 CDC23Q9UJX2 597 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 RUVBL1Q9Y265 456 aaKnown RBP14.32□□□□□ -0.12
TDP2-205ENST00000480495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
TDP2-205ENST00000480495 MAU2Q9Y6X3 613 aa14.32□□□□□ -0.12
TDP2-205ENST00000480495 IGLV3-12A0A075B6K2 115 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 H7BY64 318 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 HAT1O14929 419 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 IPO13O94829 963 aaKnown RBP14.31□□□□□ -0.12
TDP2-205ENST00000480495 ALPPP05187 535 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 FBLP22087 321 aaKnown RBP14.31□□□□□ -0.12
TDP2-205ENST00000480495 CASQ1P31415 396 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 AP1S2P56377 157 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 RPS15AP62244 130 aaKnown RBP14.31□□□□□ -0.12
TDP2-205ENST00000480495 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
TDP2-205ENST00000480495 CALCOCO2Q13137 446 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 AIMP2Q13155 320 aaKnown RBP14.31□□□□□ -0.12
TDP2-205ENST00000480495 DSG2Q14126 1118 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 COLEC12Q5KU26 742 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 SLC26A11Q86WA9 606 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 C17orf64Q86WR6 236 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 DTWD1Q8N5C7 304 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 STT3BQ8TCJ2 826 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 MIEF2Q96C03 454 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 THAP11Q96EK4 314 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 PDLIM5Q96HC4 596 aaKnown RBP14.31□□□□□ -0.12
TDP2-205ENST00000480495 PRAP1Q96NZ9 151 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 TRIM54Q9BYV2 358 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 SOX17Q9H6I2 414 aaPredicted RBP14.31□□□□□ -0.12
TDP2-205ENST00000480495 WHRNQ9P202 907 aa14.31□□□□□ -0.12
TDP2-205ENST00000480495 MED13Q9UHV7 2174 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 UBR5O95071 2799 aaPredicted RBP14.3□□□□□ -0.12
TDP2-205ENST00000480495 PCSK5Q92824 1860 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 KCNE1BA0A087WTH5 132 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 SOCS6O14544 535 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 EIF3HO15372 352 aaKnown RBP eCLIP14.3□□□□□ -0.12
TDP2-205ENST00000480495 ANXA5P08758 320 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 ENO2P09104 434 aaPredicted RBP14.3□□□□□ -0.12
TDP2-205ENST00000480495 ZGLP1P0C6A0 271 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 NAE1Q13564 534 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 FAM53BQ14153 422 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 FASTKD3Q14CZ7 662 aaKnown RBP14.3□□□□□ -0.12
TDP2-205ENST00000480495 IGFBP7Q16270 282 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 RBBP7Q16576 425 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 NDUFA9Q16795 377 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 PHKG1Q16816 387 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 HKDC1Q2TB90 917 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 DUPD1Q68J44 220 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 CAPN13Q6MZZ7 669 aaPredicted RBP14.3□□□□□ -0.12
TDP2-205ENST00000480495 LCTLQ6UWM7 567 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 MBOAT1Q6ZNC8 495 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 STRA8Q7Z7C7 330 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 ZC3HC1Q86WB0 502 aaKnown RBP14.3□□□□□ -0.12
TDP2-205ENST00000480495 TMEM151BQ8IW70 566 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 ZBED8Q8IZ13 594 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 ARHGEF39Q8N4T4 335 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 PYROXD1Q8WU10 500 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 ATL1Q8WXF7 558 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 MIB2Q96AX9 1013 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 OLFM1Q99784 485 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 HAUS8Q9BT25 410 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 CRB3Q9BUF7 120 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 SGPP1Q9BX95 441 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 FAM129AQ9BZQ8 928 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 DRC3Q9H069 523 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 ATG10Q9H0Y0 220 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 SYNPO2LQ9H987 977 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 ARL15Q9NXU5 204 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 FBXL4Q9UKA2 621 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 HS3ST3B1Q9Y662 390 aa14.3□□□□□ -0.12
TDP2-205ENST00000480495 TTLL8A6PVC2 850 aa14.29□□□□□ -0.12
TDP2-205ENST00000480495 RAD51CO43502 376 aa14.29□□□□□ -0.12
TDP2-205ENST00000480495 SLC26A3P40879 764 aa14.29□□□□□ -0.12
TDP2-205ENST00000480495 CD97P48960 835 aa14.29□□□□□ -0.12
TDP2-205ENST00000480495 MLLT10P55197 1068 aa14.29□□□□□ -0.12
TDP2-205ENST00000480495 KLC1Q07866 573 aa14.29□□□□□ -0.12
TDP2-205ENST00000480495 RAPSNQ13702 412 aa14.29□□□□□ -0.12
TDP2-205ENST00000480495 TUBB8Q3ZCM7 444 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms