RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 UBLCP1Q8WVY7 318 aaPredicted RBP6.03□□□□□ -1.44
SF3B1-209ENST00000479532 ELMO1Q92556 727 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM159Q96B96 161 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 SGF29Q96ES7 293 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 LINC00615Q96LM1 132 aaPredicted RBP6.03□□□□□ -1.44
SF3B1-209ENST00000479532 CYTH2Q99418 400 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 CPNE1Q99829 537 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 CCM2Q9BSQ5 444 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 LRRC61Q9BV99 259 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 YIPF3Q9GZM5 350 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM168Q9H0V1 697 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 CDC42EP4Q9H3Q1 356 aaKnown RBP6.03□□□□□ -1.44
SF3B1-209ENST00000479532 CENPHQ9H3R5 247 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 DPEP2Q9H4A9 486 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 EPB41L1Q9H4G0 881 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 SLC32A1Q9H598 525 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 IL21RQ9HBE5 538 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 FBXO6Q9NRD1 293 aaPredicted RBP6.03□□□□□ -1.44
SF3B1-209ENST00000479532 NLGN3Q9NZ94 848 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 MOCS1Q9NZB8 636 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 NINJ2Q9NZG7 142 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 MARCH4Q9P2E8 410 aaPredicted RBP6.03□□□□□ -1.44
SF3B1-209ENST00000479532 TMPRSS11EQ9UL52 423 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 ACSL5Q9ULC5 683 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 G3BP2Q9UN86 482 aaKnown RBP6.03□□□□□ -1.44
SF3B1-209ENST00000479532 APOBEC2Q9Y235 224 aaKnown RBP6.03□□□□□ -1.44
SF3B1-209ENST00000479532 DNAJC16Q9Y2G8 782 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 CRYL1Q9Y2S2 319 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 SH3GLB1Q9Y371 365 aa6.03□□□□□ -1.44
SF3B1-209ENST00000479532 ZFC3H1O60293 1989 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 SDK1Q7Z5N4 2213 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 CACNA1EQ15878 2313 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TCRBV9S1A1TA0A576 114 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 PABPN1LA6NDY0 278 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 MGAT4DA6NG13 374 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 CCT8L1PA6NM43 557 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 C4orf47A7E2U8 309 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 PDZK1P1A8MUH7 402 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 B4DGG1 531 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 FFAR2O15552 330 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 KDM1AO60341 852 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 OR1I1O60431 355 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 ATP5HO75947 161 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TRIM16O95361 564 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 ACSL3O95573 720 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 RPN2P04844 631 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 INHBAP08476 426 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 ABHD2P08910 425 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 SLC35G4P0C7Q5 338 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 COL6A2P12110 1019 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 KRT15P19012 456 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TACR1P25103 407 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 ECHS1P30084 290 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 SPRP35270 261 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 GP5P40197 560 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 LEPRP48357 1165 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 CTSCP53634 463 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 CSE1LP55060 971 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 INHBCP55103 352 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TUBA4AP68366 448 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 MPP1Q00013 466 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 B4GALNT1Q00973 533 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 DMPKQ09013 629 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 RPA4Q13156 261 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 BOP1Q14137 746 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 KRT33BQ14525 404 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 SEMA3AQ14563 771 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 KPNB1Q14974 876 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 NR0B2Q15466 257 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 UAP1Q16222 522 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 KYNUQ16719 465 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 DEFB133Q30KQ1 61 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 KHDC1Q4VXA5 237 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TTMPQ5BVD1 217 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 PRAMEF14Q5SWL7 426 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 GRTP1Q5TC63 336 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 LGSNQ5TDP6 509 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 STPG1Q5TH74 334 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 LRRC8EQ6NSJ5 796 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 KLC3Q6P597 504 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TRMT10BQ6PF06 316 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 OTOAQ7RTW8 1153 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 LDB1Q86U70 411 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 SLC9B2Q86UD5 537 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 ANKRD13BQ86YJ7 626 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 GATAD2AQ86YP4 633 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 NAXDQ8IW45 347 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 DENND6AQ8IWF6 608 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TRIM48Q8IWZ4 208 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 GSPT2Q8IYD1 628 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 CFAP206Q8IYR0 622 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 CLDN19Q8N6F1 224 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 EID2Q8N6I1 236 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 PPM1NQ8N819 430 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 ENDOVQ8N8Q3 282 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 FAM46DQ8NEK8 389 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 OR6C4Q8NGE1 309 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 OR4C6Q8NH72 309 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 MAPK15Q8TD08 544 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 SAP25Q8TEE9 199 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms