RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 SCNN1AP37088 669 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 SOX9P48436 509 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 POLR2JP52435 117 aaKnown RBP12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 OSTNP61366 133 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 HERVK_113P63132 956 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 PAFAH1B3Q15102 231 aaKnown RBP12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 BRAT1Q6PJG6 821 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 PRSS55Q6UWB4 352 aaPredicted RBP12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 RNF130Q86XS8 419 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 MFSD6LQ8IWD5 586 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 HS3ST5Q8IZT8 346 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 SPATA6LQ8N4H0 392 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 OR8K5Q8NH50 307 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 DCLRE1CQ96SD1 692 aaKnown RBP12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 ERVK-6Q9BXR3 956 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 SERHL2Q9H4I8 314 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 FARSBQ9NSD9 589 aaKnown RBP12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 ZNF175Q9Y473 711 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 HSPB11Q9Y547 144 aa12.78□□□□□ -0.36
CNKSR3-204ENST00000479339 A0A1W2PRG6 482 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 STX16O14662 325 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 TSPAN4O14817 238 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 ANKRD28O15084 1053 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 GSTA4O15217 222 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 CD3EAPO15446 510 aaKnown RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 TGM5O43548 720 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 ATG13O75143 517 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 B3GAT3O94766 335 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 SCELO95171 688 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 PRR35P0CG20 571 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 CHMP24386 653 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 PTPN3P26045 913 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 TNFSF8P32971 234 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 HMGCLP35914 325 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 TNFSF9P41273 254 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 ZFP36L2P47974 494 aaKnown RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF33BQ06732 778 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 SOX4Q06945 474 aaPredicted RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 MAB21L1Q13394 359 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 GBX1Q14549 363 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 TAB1Q15750 504 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 SLC14A2Q15849 920 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 KYAT1Q16773 422 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 SLC10A6Q3KNW5 377 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 SETMARQ53H47 684 aaPredicted RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 RAP1GAP2Q684P5 730 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 TYW3Q6IPR3 259 aaKnown RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 ARHGAP36Q6ZRI8 547 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 PDZD4Q76G19 769 aaPredicted RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 BMP8AQ7Z5Y6 402 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 FAM181AQ8N9Y4 354 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 C2CD4AQ8NCU7 369 aaPredicted RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 UBA3Q8TBC4 463 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 UBASH3BQ8TF42 649 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 C1orf74Q96LT6 269 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 HDHD5Q9BXW7 423 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 SPNS1Q9H2V7 528 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 INTS7Q9NVH2 962 aaKnown RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 NDRG4Q9ULP0 352 aaKnown RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 DIMT1Q9UNQ2 313 aaKnown RBP12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 PKP3Q9Y446 797 aa12.77□□□□□ -0.37
CNKSR3-204ENST00000479339 C9JVG2 144 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 BTN3A3O00478 584 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 PROM1O43490 865 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 PI15O43692 258 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 VPS26AO75436 327 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 ERN1O75460 977 aaKnown RBP12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 TSPAN12O95859 305 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 ITGB3P05106 788 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 PAMP19021 973 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 IGFBP6P24592 240 aaPredicted RBP12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 ATICP31939 592 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 NOS2P35228 1153 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 OLIG2Q13516 323 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 FAM214AQ32MH5 1076 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 UNC50Q53HI1 259 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 PCID2Q5JVF3 399 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 SLC35F1Q5T1Q4 408 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 MLIPQ5VWP3 458 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 LAIR1Q6GTX8 287 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 LAMTOR1Q6IAA8 161 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 PKN3Q6P5Z2 889 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 AHSA2Q719I0 299 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 CCDC117Q8IWD4 279 aaPredicted RBP12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 OR8H1Q8NGG4 311 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF707Q96C28 371 aaPredicted RBP12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 PHF21BQ96EK2 531 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 MSANTD3Q96H12 275 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 VAT1Q99536 393 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 SRRQ9GZT4 340 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 MMP28Q9H239 520 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 RIBC2Q9H4K1 309 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 GOLGA2P5Q9HBQ8 144 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 OLA1Q9NTK5 396 aaKnown RBP12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 PLCXD1Q9NUJ7 323 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 V9GYH0 126 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 PLXNA3P51805 1871 aa12.76□□□□□ -0.37
CNKSR3-204ENST00000479339 A0A1W2PQ09 198 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms