RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 HRASLS5Q96KN8 279 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 TNIP3Q96KP6 325 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 SEC22CQ9BRL7 303 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 DBNDD1Q9H9R9 158 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 SLC6A13Q9NSD5 602 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 PLCXD1Q9NUJ7 323 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 HECAQ9UBI9 543 aaPredicted RBP20.61■□□□□ 0.89
SDF4-206ENST00000478938 ZNF451Q9Y4E5 1061 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 FAM240BA0A1B0GVZ2 78 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 I6L893 689 aaPredicted RBP20.61■□□□□ 0.89
SDF4-206ENST00000478938 CD3EAPO15446 510 aaKnown RBP20.61■□□□□ 0.89
SDF4-206ENST00000478938 SSTR2P30874 369 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 HTR7P34969 479 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 IDH2P48735 452 aaKnown RBP20.61■□□□□ 0.89
SDF4-206ENST00000478938 RBBP7Q16576 425 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 Q6ZSR9 355 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 OR11H4Q8NGC9 324 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 OR52E4Q8NGH9 312 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 SLC9A6Q92581 669 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 RGS18Q9NS28 235 aa20.61■□□□□ 0.89
SDF4-206ENST00000478938 RGS17Q9UGC6 210 aaPredicted RBP20.61■□□□□ 0.89
SDF4-206ENST00000478938 LOC102723532A0A0G2JNH3 316 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 OR51F1A6NGY5 319 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 WWP2O00308 870 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 GJB1P08034 283 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 SP2Q02086 613 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 COL19A1Q14993 1142 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 TRAPPC3LQ5T215 181 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 CHMP1BQ7LBR1 199 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 ZSWIM9Q86XI8 627 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 DENND1CQ8IV53 801 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 LRRC71Q8N4P6 559 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 ATOH8Q96SQ7 321 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 ZNF416Q9BWM5 594 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 RBFOX1Q9NWB1 397 aaKnown RBP20.6■□□□□ 0.89
SDF4-206ENST00000478938 CD274Q9NZQ7 290 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 A0A1W2PQL4 384 aaPredicted RBP20.6■□□□□ 0.89
SDF4-206ENST00000478938 KHNYNO15037 678 aaKnown RBP20.6■□□□□ 0.89
SDF4-206ENST00000478938 CYP17A1P05093 508 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 SOX3P41225 446 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 RPL35P42766 123 aaKnown RBP20.6■□□□□ 0.89
SDF4-206ENST00000478938 CLDN20P56880 219 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 SNX16P57768 344 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 ERVFC1P60507 584 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 LAMTOR4Q0VGL1 99 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 ZNF600Q6ZNG1 722 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 CDAN1Q8IWY9 1227 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 FBXO39Q8N4B4 442 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 ATP6V1C2Q8NEY4 427 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 FANK1Q8TC84 345 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 CDK15Q96Q40 435 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 CDCP1Q9H5V8 836 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 ZFP64Q9NPA5 681 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 MARCH4Q9P2E8 410 aaPredicted RBP20.6■□□□□ 0.89
SDF4-206ENST00000478938 ZNF112Q9UJU3 913 aa20.6■□□□□ 0.89
SDF4-206ENST00000478938 MAFBQ9Y5Q3 323 aaPredicted RBP20.6■□□□□ 0.89
SDF4-206ENST00000478938 SMIM30A4D0T7 59 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 PER2O15055 1255 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 MPC2O95563 127 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 UROSP10746 265 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 ZP3P21754 424 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 FCN2Q15485 313 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 AMHR2Q16671 573 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 ZNF549Q6P9A3 640 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 FAM124AQ86V42 546 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 CILP2Q8IUL8 1156 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 OR8K3Q8NH51 312 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 WDR48Q8TAF3 677 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 SLC9A7Q96T83 725 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 SRRDQ9UH36 339 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 FNDC1Q4ZHG4 1894 aaPredicted RBP20.59■□□□□ 0.89
SDF4-206ENST00000478938 ACSM4P0C7M7 580 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 BMP8BP34820 402 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 VLDLRP98155 873 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 DMC1Q14565 340 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 LRRC66Q68CR7 880 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 ANKS6Q68DC2 871 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 BMP8AQ7Z5Y6 402 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 CCM2Q9BSQ5 444 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 NUSAP1Q9BXS6 441 aaKnown RBP20.59■□□□□ 0.89
SDF4-206ENST00000478938 MALT1Q9UDY8 824 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 UBQLN2Q9UHD9 624 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 CYB5R1Q9UHQ9 305 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 MAPRE3Q9UPY8 281 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 PRELID3BQ9Y3B1 194 aa20.59■□□□□ 0.89
SDF4-206ENST00000478938 SYN3O14994 580 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 NCAM2O15394 837 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 PROM1O43490 865 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 CFDP00746 253 aaPredicted RBP20.58■□□□□ 0.89
SDF4-206ENST00000478938 APEX1P27695 318 aaKnown RBP20.58■□□□□ 0.89
SDF4-206ENST00000478938 HAAOP46952 286 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 HTR6P50406 440 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 AKR1D1P51857 326 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 ABATP80404 500 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 RBP5P82980 135 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 ELOAQ14241 798 aaKnown RBP20.58■□□□□ 0.89
SDF4-206ENST00000478938 PTGR1Q14914 329 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 FAM174BQ3ZCQ3 159 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 SPDYE7PQ495Y7 208 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 ZBTB8OSQ8IWT0 167 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms