RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PRSS51A0A1B0GVH4 220 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 H3BNH8 94 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 UGT2B11O75310 529 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 IFNW1P05000 195 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 MYL12AP19105 171 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 PPIBP23284 216 aaKnown RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SPINT3P49223 89 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ARL4DP49703 201 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 RAB33AQ14088 237 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SELPLGQ14242 412 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 FAM46CQ5VWP2 391 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 VITQ6UXI7 678 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 LRRC70Q7Z2Q7 622 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 P2RY8Q86VZ1 359 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 AMER2Q8N7J2 671 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 FRS2Q8WU20 508 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 PIH1D2Q8WWB5 315 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 STON2Q8WXE9 905 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SLC9A6Q92581 669 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ISL2Q96A47 359 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 RHBDF1Q96CC6 855 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 NUS1Q96E22 293 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 PYURFQ96I23 114 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 MYRFLQ96LU7 910 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 COPS4Q9BT78 406 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SEMA3GQ9NS98 782 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 CLEC4EQ9ULY5 219 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 A0A1B0GTW7 788 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 PLOD2O00469 737 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 MITFO75030 526 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-204ENST00000477421 C6orf47O95873 294 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 TFAP2AP05549 437 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 ADH5P11766 374 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 HSD17B1P14061 328 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 HLA-FP30511 346 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 RPL26P61254 145 aaKnown RBP10.69□□□□□ -0.7
COL27A1-204ENST00000477421 ABHD18Q0P651 414 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 RCAN2Q14206 197 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 INAQ16352 499 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 VN1R5Q7Z5H4 357 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 ADGRG5Q8IZF4 528 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 TEX26Q8N6G2 289 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 OR2T11Q8NH01 316 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 OVCA2Q8WZ82 227 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 ART5Q96L15 291 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 CCM2Q9BSQ5 444 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 CLN6Q9NWW5 311 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 PSME2Q9UL46 239 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 CORO2BQ9UQ03 480 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 DLGAP4Q9Y2H0 992 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 PCDHB14Q9Y5E9 798 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-204ENST00000477421 KPNA4O00629 521 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-204ENST00000477421 PI15O43692 258 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 CCR7P32248 378 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 CENPAP49450 140 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 MXD1Q05195 221 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 Q6ZSR9 355 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 PACRGLQ8N7B6 248 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 WDR36Q8NI36 951 aaKnown RBP10.69□□□□□ -0.7
COL27A1-204ENST00000477421 XKR8Q9H6D3 395 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 TIMMDC1Q9NPL8 285 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 KLHL3Q9UH77 587 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 ERGIC3Q9Y282 383 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 H7BY64 318 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 E2F3O00716 465 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 TSPAN19P0C672 248 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 TACR1P25103 407 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 HTR1EP28566 365 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 RPS26P62854 115 aaKnown RBP10.69□□□□□ -0.7
COL27A1-204ENST00000477421 DUOXA1Q1HG43 343 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 CROCCP3Q8IVE0 287 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 SVOPLQ8N434 492 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 ZCCHC10Q8TBK6 192 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 BCL7CQ8WUZ0 217 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-204ENST00000477421 USP7Q93009 1102 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 MYDGFQ969H8 173 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 GLYATL1Q969I3 302 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 ABHD8Q96I13 439 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 PRAP1Q96NZ9 151 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 COL21A1Q96P44 957 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 FAIM2Q9BWQ8 316 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 ZCCHC3Q9NUD5 404 aaKnown RBP10.69□□□□□ -0.7
COL27A1-204ENST00000477421 GPRC5BQ9NZH0 403 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 CCL26Q9Y258 94 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 SPACA6W5XKT8 324 aa10.69□□□□□ -0.7
COL27A1-204ENST00000477421 TRIM43BA6NCK2 446 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 WASH3PC4AMC7 463 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PSMD11O00231 422 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 ACOT8O14734 319 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 EFCAB14O75071 495 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 SERPINB7O75635 380 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 GADD45GO95257 159 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 SOX14O95416 240 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 LAMP1P11279 417 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 IGFBP4P22692 258 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 AZGP1P25311 298 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 TIE1P35590 1138 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms