RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ZNF358Q9NW07 568 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 IRAK4Q9NWZ3 460 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 DHCR7Q9UBM7 475 aaKnown RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 PADI1Q9ULC6 663 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 LHX6Q9UPM6 363 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 SLC22A14Q9Y267 594 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ASB1Q9Y576 335 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 PCDHGA4Q9Y5G9 962 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 SEC16AO15027 2179 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 CCDC88CQ9P219 2028 aa9.27□□□□□ -0.92
HDAC3-208ENST00000476739 EXOC1LA0A1B0GW35 172 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 FEZF1A0PJY2 475 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 TRIM49D1C9J1S8 452 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 NKX2-8O15522 239 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 P2RX6O15547 441 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 CCNDBP1O95273 360 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 MT-ND3P03897 115 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 SHBGP04278 402 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 EIF2S1P05198 315 aaKnown RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 CAPN1P07384 714 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ANXA5P08758 320 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 LTA4HP09960 611 aaKnown RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 CCNYL3P0C7X3 344 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 TFEBP19484 476 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ITGAXP20702 1163 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 TYK2P29597 1187 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 SLC6A12P48065 614 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 GLRBP48167 497 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 SERPINB8P50452 374 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 FOXL2P58012 376 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ATP6V0D1P61421 351 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 CSNK1G2P78368 415 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ABATP80404 500 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 DNASE1L3Q13609 305 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 SLC9A5Q14940 896 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ERCC6LQ2NKX8 1250 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 HKDC1Q2TB90 917 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 WASHC2DQ5SRD0 308 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 RHBDD2Q6NTF9 364 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 TLDC1Q6P9B6 456 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ADGRD1Q6QNK2 874 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 TTLL10Q6ZVT0 673 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 FRA10AC1Q70Z53 315 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 TBC1D1Q86TI0 1168 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 THOC6Q86W42 341 aaKnown RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 GPSM1Q86YR5 675 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 METTL27Q8N6F8 245 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 SNRNP27Q8WVK2 155 aaKnown RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 UBLCP1Q8WVY7 318 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-208ENST00000476739 MR1Q95460 341 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 NEIL2Q969S2 332 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ISL2Q96A47 359 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 TSNARE1Q96NA8 513 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 GBP5Q96PP8 586 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ATOH8Q96SQ7 321 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ZFYVE21Q9BQ24 234 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 MACROD1Q9BQ69 325 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 SLC7A5P2Q9GIP4 190 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 VPS11Q9H270 941 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 SLC22A11Q9NSA0 550 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 TMEM184CQ9NVA4 438 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ANKMY1Q9P2S6 941 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 SNX7Q9UNH6 387 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 ACOT9Q9Y305 439 aa9.27□□□□□ -0.93
HDAC3-208ENST00000476739 A0A087X1B8 175 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 HYKKA2RU49 373 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 FITM1A5D6W6 292 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 PABPN1LA6NDY0 278 aaKnown RBP9.26□□□□□ -0.93
HDAC3-208ENST00000476739 FOXO6A8MYZ6 492 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 UBXN8O00124 270 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 LCMT2O60294 686 aaKnown RBP9.26□□□□□ -0.93
HDAC3-208ENST00000476739 PRAMEF4O60810 478 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 KATNA1O75449 491 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 WDR47O94967 919 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 KLHL2O95198 593 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 FURINP09958 794 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 MTHFD2P13995 350 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 EZRP15311 586 aaKnown RBP9.26□□□□□ -0.93
HDAC3-208ENST00000476739 ALAS2P22557 587 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 CCND1P24385 295 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 SLC26A3P40879 764 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 BCL6P41182 706 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 HSPA7P48741 367 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 SERPINB9P50453 376 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 UCNP55089 124 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 PRAMEF9Q5VWM5 478 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 FAM198BQ6UWH4 519 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 GPR155Q7Z3F1 870 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 VN1R4Q7Z5H5 301 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 C17orf64Q86WR6 236 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 SHISA5Q8N114 240 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 PDPRQ8NCN5 879 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 ZNF740Q8NDX6 193 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 ABHD11Q8NFV4 315 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 STAG3L4Q8TBR4 150 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 SLC5A11Q8WWX8 675 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 ATL1Q8WXF7 558 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 STARD8Q92502 1023 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms