RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CCL11P51671 97 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 SLC7A5Q01650 507 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 RELAQ04206 551 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 CKAP4Q07065 602 aaKnown RBP20.19■□□□□ 0.82
LIME1-204ENST00000476183 NKG7Q16617 165 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 HKDC1Q2TB90 917 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 RAB43Q86YS6 212 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 CEP97Q8IW35 865 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 CSNK1A1LQ8N752 337 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 PDLIM5Q96HC4 596 aaKnown RBP20.19■□□□□ 0.82
LIME1-204ENST00000476183 VPS39Q96JC1 886 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 SGPP1Q9BX95 441 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 ACSS2Q9NR19 701 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 NSMCE4AQ9NXX6 385 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 CTSFQ9UBX1 484 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 RUVBL1Q9Y265 456 aaKnown RBP20.19■□□□□ 0.82
LIME1-204ENST00000476183 ESYT3A0FGR9 886 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 P2RX6O15547 441 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 ALBP02768 609 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 HIST1H2AGP0C0S8 130 aaPredicted RBP20.18■□□□□ 0.82
LIME1-204ENST00000476183 HIST1H2ADP20671 130 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 CAV1Q03135 178 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 SBSNQ6UWP8 590 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 C3orf62Q6ZUJ4 267 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 PPP1R32Q7Z5V6 425 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 ARHGEF39Q8N4T4 335 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 ANKRD49Q8WVL7 239 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 ALKBH8Q96BT7 664 aaKnown RBP20.18■□□□□ 0.82
LIME1-204ENST00000476183 PTERQ96BW5 349 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 HIST1H2AHQ96KK5 128 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 SPSB2Q99619 263 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 HIST1H2AJQ99878 128 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 H2AFJQ9BTM1 129 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 LRRC1Q9BTT6 524 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 PHACTR1Q9C0D0 580 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 SLC26A1Q9H2B4 701 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 ARL15Q9NXU5 204 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 UTP6Q9NYH9 597 aaKnown RBP20.18■□□□□ 0.82
LIME1-204ENST00000476183 MTO1Q9Y2Z2 717 aaKnown RBP20.18■□□□□ 0.82
LIME1-204ENST00000476183 NBASA2RRP1 2371 aa20.18■□□□□ 0.82
LIME1-204ENST00000476183 FAM159BA6NKW6 160 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 J3QKU1 62 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 CDC7O00311 574 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 PIM1P11309 404 aaPredicted RBP20.17■□□□□ 0.82
LIME1-204ENST00000476183 AP1S2P56377 157 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 SNRPNP63162 240 aaKnown RBP20.17■□□□□ 0.82
LIME1-204ENST00000476183 PPP1R3AQ16821 1122 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 MUM1Q2TAK8 710 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 COLEC12Q5KU26 742 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 CYS1Q717R9 158 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 CCDC25Q86WR0 208 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 TMEM102Q8N9M5 508 aaPredicted RBP20.17■□□□□ 0.82
LIME1-204ENST00000476183 PYCR2Q96C36 320 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 CABS1Q96KC9 395 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 PCBD2Q9H0N5 130 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 WDR54Q9H977 334 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 MLXIPLQ9NP71 852 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 TMEM184CQ9NVA4 438 aa20.17■□□□□ 0.82
LIME1-204ENST00000476183 NPEPPSL1A6NEC2 478 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 VSTM2BA6NLU5 285 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 MASP2O00187 686 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 CEACAM4O75871 244 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 WISP3O95389 354 aaPredicted RBP20.16■□□□□ 0.82
LIME1-204ENST00000476183 GUCA1CO95843 209 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 STATHP02808 62 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 NPPBP16860 134 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 MAGEA4P43358 317 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 EMP3P54852 163 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 CSNK1G2P78368 415 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 WHAMMP3Q1A5X7 153 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 C8orf74Q6P047 294 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 LCTLQ6UWM7 567 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 ATG14Q6ZNE5 492 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 SHISA6Q6ZSJ9 500 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 ASB18Q6ZVZ8 466 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 MED25Q71SY5 747 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 VN1R4Q7Z5H5 301 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 NKAPQ8N5F7 415 aaKnown RBP20.16■□□□□ 0.82
LIME1-204ENST00000476183 OR56A3Q8NH54 315 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 ZNF592Q92610 1267 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 RERGQ96A58 199 aaPredicted RBP20.16■□□□□ 0.82
LIME1-204ENST00000476183 FBXL8Q96CD0 374 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 OR4K3Q96R72 315 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 SLC25A23Q9BV35 468 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 TRIM4Q9C037 500 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 SOX17Q9H6I2 414 aaPredicted RBP20.16■□□□□ 0.82
LIME1-204ENST00000476183 CAB39LQ9H9S4 337 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 LRRC4CQ9HCJ2 640 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 ZNF304Q9HCX3 659 aa20.16■□□□□ 0.82
LIME1-204ENST00000476183 ENO2P09104 434 aaPredicted RBP20.15■□□□□ 0.82
LIME1-204ENST00000476183 GSTA2P09210 222 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 CDH1P12830 882 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 CCND1P24385 295 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 HRH2P25021 359 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 CAPN13Q6MZZ7 669 aaPredicted RBP20.15■□□□□ 0.82
LIME1-204ENST00000476183 PRMT9Q6P2P2 845 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 C17orf64Q86WR6 236 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 FDCSPQ8NFU4 85 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 CDKL2Q92772 493 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 COL26A1Q96A83 441 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms