RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 FRG2Q64ET8 278 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 NUDT13Q86X67 352 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 CCDC36Q8IYA8 594 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
VAPB-204ENST00000475243 TMEM156Q8N614 296 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 OR5K1Q8NHB7 308 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 SUSD3Q96L08 255 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 FRG2BQ96QU4 278 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 TWNKQ96RR1 684 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 TTTY10Q9BZA0 68 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 CYP11A1P05108 521 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 CSNK2A2P19784 350 aaPredicted RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 SLC2A7Q6PXP3 512 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ZNF101Q8IZC7 436 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 OXR1Q8N573 874 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 OR2L8Q8NGY9 312 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 NTPCRQ9BSD7 190 aaKnown RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 TTYH3Q9C0H2 523 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 CKMT2P17540 419 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 PTX3P26022 381 aaPredicted RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 RPP38P78345 283 aaKnown RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 ADAM17P78536 824 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 SYT16Q17RD7 645 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 TDRPQ86YL5 185 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 CEP97Q8IW35 865 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 PHOSPHO1Q8TCT1 267 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 METTL8Q9H825 291 aaKnown RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 SIX2Q9NPC8 291 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 DMAC2Q9NW81 257 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 PARPBPQ9NWS1 579 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 BCL9LQ86UU0 1499 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 OR14I1A6ND48 311 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 GABRDO14764 452 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ARF3P61204 181 aaPredicted RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 UFM1P61960 85 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 RPS13P62277 151 aaKnown RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 ARF1P84077 181 aaKnown RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 ZNF611Q8N823 705 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 WFIKKN2Q8TEU8 576 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ZNF514Q96K75 400 aaPredicted RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 OR52B2Q96RD2 323 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 TTYH1Q9H313 450 aaPredicted RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 DNAJB9Q9UBS3 223 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 IFT172Q9UG01 1749 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 A0A1B0GVT2 93 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 H3BNX3 289 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 AHSGP02765 367 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 HOXB2P14652 356 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 FOSL2P15408 326 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 NUDT6P53370 316 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 MYLK3Q32MK0 819 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 SPIN3Q5JUX0 258 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ARL9Q6T311 187 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 NPLOC4Q8TAT6 608 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 LYARQ9NX58 379 aaKnown RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 SQORQ9Y6N5 450 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ANKRD26Q9UPS8 1709 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ZNF878C9JN71 531 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 OAZ2O95190 189 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 IL33O95760 270 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ZNF806P0C7X5 589 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 MAZP56270 477 aaKnown RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 RAB8AP61006 207 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 LIN52Q52LA3 116 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ZNF782Q6ZMW2 699 aaPredicted RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 OR52E4Q8NGH9 312 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 KCNA7Q96RP8 456 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 OXSMQ9NWU1 459 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 MYOCOSA0A1B0GUC4 107 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 DUXAA6NLW8 204 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 CCNHP51946 323 aaPredicted RBP10.68□□□□□ -0.7
VAPB-204ENST00000475243 PYHIN1Q6K0P9 492 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 YIPF7Q8N8F6 280 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 BRI3BPQ8WY22 251 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 RAB11FIP5Q9BXF6 653 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 OSBPL7Q9BZF2 842 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 FMN2Q9NZ56 1722 aa10.68□□□□□ -0.7
VAPB-204ENST00000475243 ZNF99A8MXY4 864 aaPredicted RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 ITGA5P08648 1049 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 VIPR1P32241 457 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 HSDL2Q6YN16 418 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 USP43Q70EL4 1123 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 SAMD14Q8IZD0 417 aaPredicted RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 LGI4Q8N135 537 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 NIPA2Q8N8Q9 360 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 ZNF548Q8NEK5 533 aaPredicted RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 MAGEE1Q9HCI5 957 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 PCDHGB7Q9Y5F8 929 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 AGPSO00116 658 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 SOX14O95416 240 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 GSTT2BP0CG30 244 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 PITPNAQ00169 270 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 LACTB2Q53H82 288 aaPredicted RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 SPIN4Q56A73 249 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 RBM20Q5T481 1227 aaKnown RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 PRAMEF17Q5VTA0 474 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 ANO7Q6IWH7 933 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 CELF5Q8N6W0 485 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms