RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 FAM129BQ96TA1 746 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MS4A7Q9GZW8 240 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MAGEH1Q9H213 219 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 C10orf88Q9H8K7 445 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 IL17RBQ9NRM6 502 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MS4A12Q9NXJ0 267 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RBAKQ9NYW8 714 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CXXC1Q9P0U4 656 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 STOML1Q9UBI4 398 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ZNRF3Q9ULT6 936 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 H3BMQ9 156 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 M0QYV0 167 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ECI2O75521 394 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 LYPLA1O75608 230 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RFPL3O75679 317 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 LYPLA2O95372 231 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MT-CO1P00395 513 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CSF2P04141 144 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CFHP08603 1231 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ATP5A1P25705 553 aaKnown RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 DDOSTP39656 456 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PSEN2P49810 448 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 HK3P52790 923 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PRPS1P60891 318 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SP3Q02447 781 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GTF2H3Q13889 308 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 TTLL4Q14679 1199 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CERCAMQ5T4B2 595 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PRAMEF20Q5VT98 475 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ADGRD1Q6QNK2 874 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 TMEM108Q6UXF1 575 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 IZUMO2Q6UXV1 221 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PLEKHG7Q6ZR37 379 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ECHDC2Q86YB7 292 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ARMC8Q8IUR7 673 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ARID3BQ8IVW6 561 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 C1orf210Q8IVY1 113 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CERS5Q8N5B7 392 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 TXNDC5Q8NBS9 432 aaKnown RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SLC35G2Q8TBE7 412 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CPT1CQ8TCG5 803 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PPP1R13LQ8WUF5 828 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SNAPC3Q92966 411 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 KLHL29Q96CT2 875 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PTCD3Q96EY7 689 aaKnown RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 C14orf79Q96F83 325 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MCCC1Q96RQ3 725 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 DMRTA2Q96SC8 542 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CADM1Q9BY67 442 aaKnown RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RNF26Q9BY78 433 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GSDMCQ9BYG8 508 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RAB33BQ9H082 229 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CSTL1Q9H114 145 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 HEXA-AS1Q9H8Q6 139 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 XPNPEP1Q9NQW7 623 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PCDHB16Q9NRJ7 776 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GIMAP4Q9NUV9 329 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CHRNA9Q9UGM1 479 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 NCKAP1Q9Y2A7 1128 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ABCB11O95342 1321 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SLC5A10A0PJK1 596 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 POM121BA6NF01 834 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 METTL15A6NJ78 407 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 I6L893 689 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ARHGEF9O43307 516 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GSRP00390 522 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 IGFBP1P08833 259 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SLC10A3P09131 477 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PSKH1P11801 424 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SREBF1P36956 1147 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MC3RP41968 323 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MMP13P45452 471 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 DNASE1L3Q13609 305 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PDK3Q15120 406 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 TSC22D1Q15714 1073 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PARP15Q460N3 678 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 C9orf152Q5JTZ5 239 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SCARA3Q6AZY7 606 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ACSM5Q6NUN0 579 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ARMC6Q6NXE6 501 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 KLHL24Q6TFL4 600 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 USP30Q70CQ3 517 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RASAL3Q86YV0 1011 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SLC25A41Q8N5S1 370 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ARFGAP2Q8N6H7 521 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CD300LFQ8TDQ1 290 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GDPD5Q8WTR4 605 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 DNAJA4Q8WW22 397 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 AUTS2Q8WXX7 1259 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 EEF2KMTQ96G04 330 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PKP2Q99959 881 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PDCD2LQ9BRP1 358 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PELOQ9BRX2 385 aaKnown RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GPR87Q9BY21 358 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ITPAQ9BY32 194 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 TMEM38AQ9H6F2 299 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 METTL7AQ9H8H3 244 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CHST7Q9NS84 486 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 KRT84Q9NSB2 600 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 HIF1ANQ9NWT6 349 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms