RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CYP2F1P24903 491 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CSKP41240 450 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 AKR1D1P51857 326 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 EPHA4P54764 986 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 GAGE1Q13065 139 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 KLHL12Q53G59 568 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 AGAP7PQ5VUJ5 663 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 TMEM81Q6P7N7 255 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RFWD3Q6PCD5 774 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RIPOR1Q6ZS17 1223 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SYT9Q86SS6 491 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MMP21Q8N119 569 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 METTL4Q8N3J2 472 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 C19orf47Q8N9M1 422 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 POMGNT2Q8NAT1 580 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 NHLRC2Q8NBF2 726 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 OIT3Q8WWZ8 545 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CASKIN2Q8WXE0 1202 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 HAS1Q92839 578 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PRRC1Q96M27 445 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 OR5M11Q96RB7 305 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ZSCAN10Q96SZ4 725 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 EBNA1BP2Q99848 306 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 PPA2Q9H2U2 334 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 GOLPH3Q9H4A6 298 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 TMEM134Q9H6X4 195 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MED20Q9H944 212 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CNOT10Q9H9A5 744 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 RPF1Q9H9Y2 349 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 MBNL1Q9NR56 388 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 ABCD2Q9UBJ2 740 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 LPAR3Q9UBY5 353 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MKLN1Q9UL63 735 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PPM1HQ9ULR3 514 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PADI2Q9Y2J8 665 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 HYOU1Q9Y4L1 999 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MYBBP1AQ9BQG0 1328 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 CD8B2A6NJW9 211 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 H3BQ06 376 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 K7EQM0 130 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 HCN1O60741 890 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 OPHN1O60890 802 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RHOBTB1O94844 696 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 GOT2P00505 430 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 SPATA31C1P0DKV0 1188 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MBL2P11226 248 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 ITIH1P19827 911 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 GLRA1P23415 457 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 EDNRBP24530 442 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SLC1A2P43004 574 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 FMO5P49326 533 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SUOXP51687 545 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RAB1AP62820 205 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CCZ1BP86790 482 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CCZ1P86791 482 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 GUCY1A3Q02108 690 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 C16orf72Q14CZ0 275 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PCLAFQ15004 111 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PDK3Q15120 406 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 FAM98CQ17RN3 349 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 EMBQ6PCB8 327 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CERS6Q6ZMG9 384 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CPNE8Q86YQ8 564 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ABRAQ8N0Z2 381 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CCNYQ8ND76 341 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MRGPRDQ8TDS7 321 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 FAM222BQ8WU58 562 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SLC35F5Q8WV83 523 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SSH1Q8WYL5 1049 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 AP3S1Q92572 193 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 TMBIM1Q969X1 311 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SLC7A6OSQ96CW6 309 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 SLC45A3Q96JT2 553 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MRGPRX1Q96LB2 322 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ZNF597Q96LX8 424 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SLC46A1Q96NT5 459 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 BIRC8Q96P09 236 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ZNF607Q96SK3 696 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PNKPQ96T60 521 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PTDSS2Q9BVG9 487 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 BCAS3Q9H6U6 928 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RIOX1Q9H6W3 641 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ABCB9Q9NP78 766 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SAYSD1Q9NPB0 183 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 KCNG2Q9UJ96 466 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 TBC1D24Q9ULP9 559 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CYP8B1Q9UNU6 501 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SNX24Q9Y343 169 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 UTP11Q9Y3A2 253 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 CSADQ9Y600 493 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 AUP1Q9Y679 476 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PTCH1Q13635 1447 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ADGRL3Q9HAR2 1447 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ARHGEF11O15085 1522 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 A0A1B0GUH1 482 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 A0A1B0GW15 77 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 FAM92AA1XBS5 289 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 FAM149AA5PLN7 773 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 TMEM229AB2RXF0 380 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 M0QYV0 167 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms