RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PLEKP08567 350 aaPredicted RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 INHBBP09529 407 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 INSRRP14616 1297 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 ITGALP20701 1170 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 MAGP20916 626 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 GABRB3P28472 473 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 RBL1P28749 1068 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 CDH5P33151 784 aaPredicted RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 ACTR1BP42025 376 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 RPS5P46782 204 aaKnown RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC5A3P53794 718 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 GNG2P59768 71 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 RPS16P62249 146 aaKnown RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 VSNL1P62760 191 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 BNC1Q01954 994 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 SP2Q02086 613 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 TDGQ13569 410 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 UBAP2LQ14157 1087 aaKnown RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 PDK3Q15120 406 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 BMT2Q1RMZ1 405 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 GOLGA7BQ2TAP0 167 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 C3orf36Q3SXR2 165 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 BEND3Q5T5X7 828 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 NKAIN2Q5VXU1 208 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 MBNL2Q5VZF2 373 aaKnown RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 KRT79Q5XKE5 535 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 SHISA2Q6UWI4 295 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 FRMD7Q6ZUT3 714 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 USP53Q70EK8 1073 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC26A9Q7LBE3 791 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 RD3Q7Z3Z2 195 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 THEM5Q8N1Q8 247 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 L3MBTL4Q8NA19 623 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM47BQ8NA70 645 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 PDZD8Q8NEN9 1154 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 OR7D4Q8NG98 312 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 TOP1MTQ969P6 601 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 GTPBP3Q969Y2 492 aaKnown RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 GAL3ST3Q96A11 431 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC35A4Q96G79 324 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 MRGPRX3Q96LB0 322 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 OLFM1Q99784 485 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 SMOQ99835 787 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 APOL2Q9BQE5 337 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 AKIRIN1Q9H9L7 192 aaPredicted RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 CCNB1IP1Q9NPC3 277 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 MS4A12Q9NXJ0 267 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 CTTNBP2NLQ9P2B4 639 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 CHRNA9Q9UGM1 479 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 INSL6Q9Y581 213 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 KCNMB2Q9Y691 235 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 GRIN2DO15399 1336 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 NRCAMQ92823 1304 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 TRAV25A0A0B4J276 109 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 TCRBV21S2A2A0A5A6 115 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CDC14CA4D256 554 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CD8B2A6NJW9 211 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ASB14A6NK59 587 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ANXA2P2A6NMY6 339 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MARCH11A6NNE9 402 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 NPIPB8E9PQR5 432 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 F8W036 122 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 AGPSO00116 658 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNF264O43296 627 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 AKAP8O43823 692 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 TSPAN2O60636 221 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CNTN5O94779 1100 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 NOL4O94818 638 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 SLCO2B1O94956 709 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MT-ND5P03915 603 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 GBAP04062 536 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 C8BP07358 591 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CYP2C8P10632 490 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CCNB1P14635 433 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 NPPBP16860 134 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ITIH1P19827 911 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MSH3P20585 1137 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CD27P26842 260 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 GSSP48637 474 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 JAK3P52333 1124 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PRKAG1P54619 331 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 BCAT1P54687 386 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 GFRA1P56159 465 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 NUP107P57740 925 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 AP3S2P59780 193 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 DCDC1P59894 354 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ECT2LQ008S8 904 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ENPP2Q13822 863 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 IL11RAQ14626 422 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 RNF44Q7L0R7 432 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 VRK2Q86Y07 508 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PLD3Q8IV08 490 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MMAAQ8IVH4 418 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 KIRREL3Q8IZU9 778 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 C1orf52Q8N6N3 182 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 C12orf29Q8N999 325 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CPEB3Q8NE35 698 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 OR4K14Q8NGD5 310 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 OR4C15Q8NGM1 316 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 GLYATL2Q8WU03 294 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms