RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 LAMA5O15230 3695 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 LOC105369274A0A096LPK9 316 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 LOC102723532A0A0G2JNH3 316 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 ZNF839A8K0R7 811 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 A8MU76 341 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 C1QTNF9BB2RNN3 333 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 HMGB1P1B2RPK0 211 aaPredicted RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 TM9SF1O15321 606 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 CCNT2O60583 730 aaKnown RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 CSO75390 466 aaKnown RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 FKBP9O95302 570 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 TIAF1O95411 115 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 ZBTB11O95625 1053 aaPredicted RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 MSL3P1P0C860 447 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 C1QTNF9P0C862 333 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 EBLN1P0CF75 366 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 CDK4P11802 303 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 GFAPP14136 432 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 HGFP14210 728 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 CCND1P24385 295 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 BCL6P41182 706 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 NAGLUP54802 743 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 INHBCP55103 352 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 ERVPABLB-1P60509 514 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 ABATP80404 500 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 REEP5Q00765 189 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 RELAQ04206 551 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 CDC16Q13042 620 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 TRA2AQ13595 282 aaKnown RBP eCLIP9.94□□□□□ -0.822e-6■■■□□ 15.3
CASC3-204ENST00000474190 DOC2AQ14183 400 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 SF1Q15637 639 aaKnown RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 SNAP47Q5SQN1 464 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 FRMPD2BQ6IN97 320 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 LETMD1Q6P1Q0 360 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 NXPE4Q6UWF7 544 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 OR4N4Q8N0Y3 316 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 SHISA5Q8N114 240 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 TEX9Q8N6V9 391 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 ANKRD53Q8N9V6 530 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 L3MBTL4Q8NA19 623 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 SLC5A11Q8WWX8 675 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 SLC22A18Q96BI1 424 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 AHCYL2Q96HN2 611 aaKnown RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 SPRY4Q9C004 299 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 PCBD2Q9H0N5 130 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 APMAPQ9HDC9 416 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 MRPS30Q9NP92 439 aaKnown RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 GEMIN8Q9NWZ8 242 aaKnown RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 GPRC5BQ9NZH0 403 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 ZMIZ1Q9ULJ6 1067 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 CLCA2Q9UQC9 943 aa9.94□□□□□ -0.82
CASC3-204ENST00000474190 DSPP15924 2871 aaKnown RBP9.94□□□□□ -0.82
CASC3-204ENST00000474190 C4orf51C9J302 202 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 HGSO14964 777 aaPredicted RBP9.93□□□□□ -0.82
CASC3-204ENST00000474190 P2RX6O15547 441 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 ITM2AO43736 263 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 KDM1AO60341 852 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 SMIM24O75264 130 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 MYL2P10916 166 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 SPINK2P20155 84 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 SEPHS1P49903 392 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 FOXA1P55317 472 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 MEF2AQ02078 507 aaPredicted RBP9.93□□□□□ -0.82
CASC3-204ENST00000474190 HYAL2Q12891 473 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 PRKAA1Q13131 559 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 GTF2H2Q13888 395 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 TBCCQ15814 346 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 PDK4Q16654 411 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 PRAMEF17Q5VTA0 474 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 LIPMQ5VYY2 423 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 ATG9BQ674R7 924 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 GTF2H2CQ6P1K8 395 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 ZCCHC23Q6ZST2 131 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 FRMD7Q6ZUT3 714 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 SYVN1Q86TM6 617 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 KMT5CQ86Y97 462 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 CREB3L4Q8TEY5 395 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 ZUFSPQ96AP4 578 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 ZNF501Q96CX3 271 aaPredicted RBP9.93□□□□□ -0.82
CASC3-204ENST00000474190 TM4SF19Q96DZ7 209 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 CDK15Q96Q40 435 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 RUFY1Q96T51 708 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 SORT1Q99523 831 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 HAUS8Q9BT25 410 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 NTMT1Q9BV86 223 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 TMEM121BQ9BXQ6 578 aaPredicted RBP9.93□□□□□ -0.82
CASC3-204ENST00000474190 EHD1Q9H4M9 534 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 SYNDIG1Q9H7V2 258 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 NOL11Q9H8H0 719 aaKnown RBP9.93□□□□□ -0.82
CASC3-204ENST00000474190 PELI2Q9HAT8 420 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 ABCF3Q9NUQ8 709 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 TMEM184CQ9NVA4 438 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 OPTCQ9UBM4 332 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 KLK13Q9UKR3 277 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 TMCO1Q9UM00 188 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 RNF11Q9Y3C5 154 aa9.93□□□□□ -0.82
CASC3-204ENST00000474190 TNPO3Q9Y5L0 923 aaKnown RBP9.93□□□□□ -0.82
CASC3-204ENST00000474190 LOC400499M0QZD8 3231 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 SMG1Q96Q15 3661 aaKnown RBP9.92□□□□□ -0.82
CASC3-204ENST00000474190 DMXL2Q8TDJ6 3036 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms