RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 MPZL3Q6UWV2 235 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 KCTD20Q7Z5Y7 419 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 GALNT7Q86SF2 657 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 ZBTB8OSQ8IWT0 167 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 SLC22A15Q8IZD6 547 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 NAT16Q8N8M0 369 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 ZNF540Q8NDQ6 660 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 PPHLN1Q8NEY8 458 aaKnown RBP9.81□□□□□ -0.84
APTX-216ENST00000472896 OR10T2Q8NGX3 314 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 CNIH3Q8TBE1 160 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 RNF139Q8WU17 664 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 GTF2H4Q92759 462 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 RPL3LQ92901 407 aaKnown RBP9.81□□□□□ -0.84
APTX-216ENST00000472896 SNAPC3Q92966 411 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 TCEAL3Q969E4 200 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 TUBGCP3Q96CW5 907 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 SLC47A1Q96FL8 570 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 LOXL4Q96JB6 756 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 DMRTB1Q96MA1 342 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 SIGLEC11Q96RL6 698 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 TTYH2Q9BSA4 534 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 ACAT2Q9BWD1 397 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 ERVK-6Q9BXR3 956 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 NUSAP1Q9BXS6 441 aaKnown RBP9.81□□□□□ -0.84
APTX-216ENST00000472896 BRINP2Q9C0B6 783 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 RPF1Q9H9Y2 349 aaKnown RBP9.81□□□□□ -0.84
APTX-216ENST00000472896 C3orf14Q9HBI5 128 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 KLHL21Q9UJP4 597 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 VPS4AQ9UN37 437 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 RNF6Q9Y252 685 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 BTRCQ9Y297 605 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 TLR6Q9Y2C9 796 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 DNAJC15Q9Y5T4 150 aa9.81□□□□□ -0.84
APTX-216ENST00000472896 PDCD11Q14690 1871 aaKnown RBP9.81□□□□□ -0.84
APTX-216ENST00000472896 ZFC3H1O60293 1989 aaKnown RBP9.81□□□□□ -0.84
APTX-216ENST00000472896 ASPDHA6ND91 283 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ARHGAP33O14559 1287 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 DSCR3O14972 297 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 PIP5K1BO14986 540 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ZZEF1O43149 2961 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ZBTB24O43167 697 aaPredicted RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 NOBOXO60393 691 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 FAM20BO75063 409 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SLC22A3O75751 556 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SCELO95171 688 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 FADS2O95864 444 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 F9P00740 461 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 FTH1P02794 183 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 PRKCBP05771 671 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 DBTP11182 482 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 MSH3P20585 1137 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 CES1P23141 567 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ARNTP27540 789 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 HLA-DMAP28067 261 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 CTHP32929 405 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 DCTP40126 519 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SLC9A3P48764 834 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 RGS7P49802 495 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 POLR2JP52435 117 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 EPHA5P54756 1037 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.8□□□□□ -0.84
APTX-216ENST00000472896 TWF1Q12792 350 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 RAPSNQ13702 412 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 DGCR6Q14129 220 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ZNF460Q14592 562 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 PAGE3Q5JUK9 113 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 DGKKQ5KSL6 1271 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 FAM205BPQ63HN1 556 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SPESP1Q6UW49 350 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 LYPD8Q6UX82 237 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SYVN1Q86TM6 617 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 TCAIMQ8N3R3 496 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 DTWD1Q8N5C7 304 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 C1orf127Q8N9H9 656 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 GALNT11Q8NCW6 608 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 APPL2Q8NEU8 664 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 OR8J3Q8NGG0 315 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 CSGALNACT1Q8TDX6 532 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SLC35F5Q8WV83 523 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 CEP19Q96LK0 163 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 PPP1R2P1Q96PQ5 205 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 OR2A14Q96R47 310 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 C8orf33Q9H7E9 229 aaPredicted RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 LIN7BQ9HAP6 207 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 EIF3KQ9UBQ5 218 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 TRMT6Q9UJA5 497 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 PCDHB14Q9Y5E9 798 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 MAGED1Q9Y5V3 778 aaPredicted RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 V9GYQ6 96 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ZFYVE26Q68DK2 2539 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SPAG17Q6Q759 2223 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ATG2BQ96BY7 2078 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 A0A0X1KG70 313 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SMIM28A0A1B0GU29 152 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 DCLK1O15075 740 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 GSTA4O15217 222 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 RPP40O75818 363 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 PGLSO95336 258 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms