RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 KCNJ16Q9NPI9 418 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 A0A1W2PPV9 198 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 FAM90A27PA6NNH2 459 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 FOXS1O43638 330 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 NEURL1O76050 574 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 SUN1O94901 812 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 ZWINTO95229 277 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 ZNF24P17028 368 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 YBX1P67809 324 aaKnown RBP17.95■□□□□ 0.46
SORT1-203ENST00000471996 NAA25Q14CX7 972 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 HKDC1Q2TB90 917 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 RNFT1Q5M7Z0 435 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 TMEM211Q6ICI0 200 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 LRRC8BQ6P9F7 803 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 RCOR2Q8IZ40 523 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 ARHGEF39Q8N4T4 335 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 RAB42Q8N4Z0 105 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 HORMAD2Q8N7B1 307 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 FAM57AQ8TBR7 257 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 HDAC10Q969S8 669 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 SPATA13Q96N96 652 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 CYTH2Q99418 400 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 DPH7Q9BTV6 452 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 CARD6Q9BX69 1037 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 VN1R1Q9GZP7 353 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 SLC24A3Q9HC58 644 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 RNF6Q9Y252 685 aa17.95■□□□□ 0.46
SORT1-203ENST00000471996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.95■□□□□ 0.46
SORT1-203ENST00000471996 A0A0A6YYC8 382 aaPredicted RBP17.94■□□□□ 0.46
SORT1-203ENST00000471996 CCDC162PA2VCL2 907 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 MROH6A6NGR9 719 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 I3L1I5 382 aaPredicted RBP17.94■□□□□ 0.46
SORT1-203ENST00000471996 MAN1A2O60476 641 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 PHF2O75151 1096 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 VPS26AO75436 327 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 STK10O94804 968 aaKnown RBP17.94■□□□□ 0.46
SORT1-203ENST00000471996 APOA4P06727 396 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 OC90Q02509 493 aaPredicted RBP17.94■□□□□ 0.46
SORT1-203ENST00000471996 MYBPHQ13203 477 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 KCTD11Q693B1 232 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 LANCL3Q6ZV70 420 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 CD163Q86VB7 1156 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 CDKL3Q8IVW4 592 aaPredicted RBP17.94■□□□□ 0.46
SORT1-203ENST00000471996 KATNAL2Q8IYT4 538 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 LKAAEAR1Q8TD35 194 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 TTC1Q99614 292 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 OLFM1Q99784 485 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 TSSK1BQ9BXA7 367 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 HEMGNQ9BXL5 484 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 DRC3Q9H069 523 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 SYNPO2LQ9H987 977 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 C19orf25Q9UFG5 118 aaPredicted RBP17.94■□□□□ 0.46
SORT1-203ENST00000471996 HRH3Q9Y5N1 445 aa17.94■□□□□ 0.46
SORT1-203ENST00000471996 GABRR3A8MPY1 467 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 IQCF5A8MTL0 148 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 C1orf105O95561 183 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 TPOP07202 933 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 CYC1P08574 325 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 PTGER1P34995 402 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 PTGS2P35354 604 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 MAT1AQ00266 395 aaKnown RBP17.93■□□□□ 0.46
SORT1-203ENST00000471996 LTBQ06643 244 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 CEBPEQ15744 281 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 CCSMST1Q4G0I0 132 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 M1APQ8TC57 530 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 ACTL9Q8TC94 416 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 DNAJB12Q9NXW2 375 aaKnown RBP17.93■□□□□ 0.46
SORT1-203ENST00000471996 LRFN1Q9P244 771 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 ST6GALNAC2Q9UJ37 374 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 GNPTGQ9UJJ9 305 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 VPS13CQ709C8 3753 aa17.93■□□□□ 0.46
SORT1-203ENST00000471996 ABCA4P78363 2273 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 MAP1AP78559 2803 aaPredicted RBP17.92■□□□□ 0.46
SORT1-203ENST00000471996 KRT87PA6NCN2 255 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 AKR1B10O60218 316 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 AOAHP28039 575 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 CMPK1P30085 196 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 BDKRB1P46663 353 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 UBASH3AP57075 661 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 FAM53BQ14153 422 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 IQCB1Q15051 598 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 TCEAL1Q15170 157 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 EXT1Q16394 746 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 MAPKAPK3Q16644 382 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 CCDC181Q5TID7 509 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 CPSF7Q8N684 471 aaKnown RBP17.92■□□□□ 0.46
SORT1-203ENST00000471996 RND1Q92730 232 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 PLCD4Q9BRC7 762 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 MMP25Q9NPA2 562 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 TTC7AQ9ULT0 858 aaPredicted RBP17.92■□□□□ 0.46
SORT1-203ENST00000471996 MRFAP1Q9Y605 127 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 ALG6Q9Y672 507 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 GTF3C1Q12789 2109 aa17.92■□□□□ 0.46
SORT1-203ENST00000471996 A0A0U1RQJ8 604 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 A0A1B0GTH9 108 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 SOWAHDA6NJG2 315 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 CDK2AP1O14519 115 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 NME2P1O60361 137 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 RBP3P10745 1247 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 NME2P22392 152 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms