RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SDCCAG8Q86SQ7 713 aaPredicted RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 KCNMB4Q86W47 210 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 LRRC6Q86X45 466 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 PDSS2Q86YH6 399 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 SLC35F6Q8N357 371 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 SIRT6Q8N6T7 355 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 NAT8LQ8N9F0 302 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 OR9A4Q8NGU2 314 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 CD200R1Q8TD46 325 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 GRHL3Q8TE85 626 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 SSC4DQ8WTU2 575 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 EEF1AKMT1Q8WVE0 214 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 SLC22A18Q96BI1 424 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 MOCOSQ96EN8 888 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 CNDP1Q96KN2 507 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 FER1L6-AS2Q96M78 137 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 PANX3Q96QZ0 392 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 TAAR6Q96RI8 345 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 YIPF2Q9BWQ6 316 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 ATG10Q9H0Y0 220 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 KCNF1Q9H3M0 494 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 WDR54Q9H977 334 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 MRPS30Q9NP92 439 aaKnown RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 IARS2Q9NSE4 1012 aaKnown RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 C20orf96Q9NUD7 363 aaPredicted RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 C5AR2Q9P296 337 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 PADI2Q9Y2J8 665 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 COPG1Q9Y678 874 aaKnown RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 CSMD2Q7Z408 3487 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 ADGRG4Q8IZF6 3080 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 CELSR1Q9NYQ6 3014 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 FAM237BA0A1B0GVD1 139 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 CTAGE9A4FU28 777 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ANKUB1A6NFN9 424 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 USP27XA6NNY8 438 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 IDSB3KWA1 339 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 FANCGO15287 622 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 PIAS1O75925 651 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 AHSGP02765 367 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ALBP02768 609 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ITGAMP11215 1152 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 IVDP26440 423 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 IMPA1P29218 277 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 RPA3P35244 121 aaPredicted RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 PPARGP37231 505 aaPredicted RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 SLC26A3P40879 764 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ADARP55265 1226 aaKnown RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 MEF2AQ02078 507 aaPredicted RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 PRDX1Q06830 199 aaKnown RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 AIMP2Q13155 320 aaKnown RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 DSG2Q14126 1118 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 CYP1B1Q16678 543 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 PHKG1Q16816 387 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TCTE1Q5JU00 501 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 FCRLBQ6BAA4 426 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TTC23LQ6PF05 361 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 CCDC137Q6PK04 289 aaKnown RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 PAQR3Q6TCH7 311 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TMEM207Q6UWW9 146 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 LANCL3Q6ZV70 420 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ZC3H7AQ8IWR0 971 aaKnown RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 IQCKQ8N0W5 287 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TXLNBQ8N3L3 684 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ZADH2Q8N4Q0 377 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 CSNK1A1LQ8N752 337 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TTC29Q8NA56 475 aaPredicted RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 KCT2Q8NC54 265 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ZNF740Q8NDX6 193 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 MCUQ8NE86 351 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TRIM58Q8NG06 486 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 GSDMBQ8TAX9 411 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 BRIX1Q8TDN6 353 aaKnown RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 SMPDL3AQ92484 453 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 FKBP10Q96AY3 582 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 MIEF2Q96C03 454 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 MMABQ96EY8 250 aaPredicted RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 CABS1Q96KC9 395 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TCF12Q99081 682 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 NPAS2Q99743 824 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ZFYVE21Q9BQ24 234 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 CRB3Q9BUF7 120 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TSSK1BQ9BXA7 367 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ILKAPQ9H0C8 392 aaPredicted RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 SPNS1Q9H2V7 528 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TRMT1Q9NXH9 659 aaKnown RBP7.67□□□□□ -1.18
USP48-207ENST00000471752 PTGFRNQ9P2B2 879 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 TRPC4Q9UBN4 977 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 PCYOX1Q9UHG3 505 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 FBXO5Q9UKT4 447 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 PDE10AQ9Y233 779 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 OSGIN2Q9Y236 505 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 ZKSCAN5Q9Y2L8 839 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 DHRS7Q9Y394 339 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 MAD1L1Q9Y6D9 718 aa7.67□□□□□ -1.18
USP48-207ENST00000471752 IGLV3-12A0A075B6K2 115 aa7.66□□□□□ -1.18
USP48-207ENST00000471752 ZNF860A6NHJ4 632 aa7.66□□□□□ -1.18
USP48-207ENST00000471752 SGK494L7N484 410 aa7.66□□□□□ -1.18
USP48-207ENST00000471752 SMAPO00193 183 aa7.66□□□□□ -1.18
USP48-207ENST00000471752 TP73O15350 636 aa7.66□□□□□ -1.18
USP48-207ENST00000471752 LRRTM2O43300 516 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms