RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 KAT6BQ8WYB5 2073 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 IGHV4-30-2A0A087WSY4 118 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 TRBV4-1A0A0J9YWV2 114 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 A0A1W2PPK0 400 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 ANKRD18BA2A2Z9 1011 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 A8MXK9 166 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 SHISA9B4DS77 424 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 C2CD4DB7Z1M9 353 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 TRIM77I1YAP6 450 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 PTGESO14684 152 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 TFECO14948 347 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 ADAM20O43506 726 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 SNAP91O60641 907 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 LRCH4O75427 683 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 PGM3O95394 542 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 BAG3O95817 575 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 IGKV3-15P01624 115 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 ABCB1P08183 1280 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 CYP11B2P19099 503 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 CD22P20273 847 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 BCL3P20749 454 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 CAPGP40121 348 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 LHX1P48742 406 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 CLNS1AP54105 237 aaKnown RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 CD300CQ08708 224 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 FCHO2Q0JRZ9 810 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 TRAP1Q12931 704 aaKnown RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 STK4Q13043 487 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 VEZF1Q14119 521 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 SIM2Q14190 667 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 NPTX1Q15818 432 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 FAM189A2Q15884 450 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 C15orf32Q32M92 178 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 C6orf163Q5TEZ5 329 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 SEL1L3Q68CR1 1132 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 LCLAT1Q6UWP7 414 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 SLC24A5Q71RS6 500 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 FCRLAQ7L513 359 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 CHMP1BQ7LBR1 199 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 C11orf53Q8IXP5 236 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 NDUFAF2Q8N183 169 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 OR7A2PQ8NGA2 310 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 OR5T2Q8NGG2 359 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 C9orf43Q8TAL5 461 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 ZPLD1Q8TCW7 415 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 NPRL2Q8WTW4 380 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 TEKT4Q8WW24 435 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 ATL1Q8WXF7 558 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 PIK3R3Q92569 461 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 TOMM40LQ969M1 308 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 PDLIM5Q96HC4 596 aaKnown RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF597Q96LX8 424 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 PARLQ9H300 379 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 TUBB1Q9H4B7 451 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 HEXA-AS1Q9H8Q6 139 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 MTHFD2LQ9H903 347 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 CNOT10Q9H9A5 744 aaKnown RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 GPN1Q9HCN4 374 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 OLAHQ9NV23 265 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 GPR83Q9NYM4 423 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 GDE1Q9NZC3 331 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 IL17BQ9UHF5 180 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 DDX25Q9UHL0 483 aaKnown RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 LNPEPQ9UIQ6 1025 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 GPR34Q9UPC5 381 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 CHKBQ9Y259 395 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 KLF2Q9Y5W3 355 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 SNX8Q9Y5X2 465 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 SELENOKQ9Y6D0 94 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 TDRD6O60522 2096 aaKnown RBP1.14□□□□□ -2.23
UBXN4-207ENST00000471246 IGSF1Q8N6C5 1336 aa1.14□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CASTOR2A6NHX0 329 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 KLLNB2CW77 178 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 NPIPB9F8W1W9 429 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 SLC1A7O00341 560 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 SURF4O15260 269 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 AHCYL1O43865 530 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 BEST1O76090 585 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 NXPH4O95158 308 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 POP4O95707 220 aaKnown RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 HPP00738 406 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 ATP5BP06576 529 aaKnown RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CSN3P07498 182 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 MELTFP08582 738 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 DUX4L4P0CJ87 422 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 EPCAMP16422 314 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 ELAVL4P26378 380 aaKnown RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 PIK3R1P27986 724 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CDC25CP30307 473 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 ACTN2P35609 894 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 ZFP36L2P47974 494 aaKnown RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 LIG4P49917 911 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CLDN15P56746 228 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 DCDC1P59894 354 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 DHODHQ02127 395 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 PRKG2Q13237 762 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 SRSF9Q13242 221 aaKnown RBP eCLIP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 SGCGQ13326 291 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms