RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 FBXL20Q96IG2 436 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 ZNF583Q96ND8 569 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 SPOCK3Q9BQ16 436 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 CPPED1Q9BRF8 314 aaPredicted RBP7.76□□□□□ -1.17
SMC4-212ENST00000470240 TBCDQ9BTW9 1192 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 TRIM8Q9BZR9 551 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 ACTL8Q9H568 366 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 RC3H2Q9HBD1 1191 aaKnown RBP7.76□□□□□ -1.17
SMC4-212ENST00000470240 PRDM6Q9NQX0 595 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 TDP1Q9NUW8 608 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 SLAMF8Q9P0V8 285 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 IL36AQ9UHA7 158 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 CIDEBQ9UHD4 219 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 ZNHIT2Q9UHR6 403 aa7.76□□□□□ -1.17
SMC4-212ENST00000470240 INTS6Q9UL03 887 aaKnown RBP7.76□□□□□ -1.17
SMC4-212ENST00000470240 PIKFYVEQ9Y2I7 2098 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 TSPAN11A1L157 253 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 TRIM64CA6NLI5 447 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 H3BSA7 217 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 PSMD11O00231 422 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 CCL16O15467 120 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 HS6ST1O60243 411 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 UGT2B11O75310 529 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 DNAJB5O75953 348 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SNAP29O95721 258 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SERPINA1P01009 418 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 TIMP1P01033 207 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 MT-ND1P03886 318 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 ELFN1P0C7U0 828 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 PCNAP12004 261 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 TYRP14679 529 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 LHCGRP22888 699 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SLC6A12P48065 614 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 CDH15P55291 814 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 ADARB1P78563 741 aaKnown RBP7.75□□□□□ -1.17
SMC4-212ENST00000470240 DEFB103AP81534 67 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SELPLGQ14242 412 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 GBX1Q14549 363 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 HIST2H2ACQ16777 129 aaPredicted RBP7.75□□□□□ -1.17
SMC4-212ENST00000470240 DUOXA1Q1HG43 343 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SPIN4Q56A73 249 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 ZNF805Q5CZA5 627 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 XKR6Q5GH73 641 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 PAGE2BQ5JRK9 111 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 FAM219BQ5XKK7 198 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 HIST2H2AA3Q6FI13 130 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 GRHL2Q6ISB3 625 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 NEK5Q6P3R8 708 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SPESP1Q6UW49 350 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 MBOAT1Q6ZNC8 495 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SERPINA11Q86U17 422 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 ZSWIM9Q86XI8 627 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 OFCC1Q8IZS5 231 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 CLHC1Q8NHS4 586 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SLC22A17Q8WUG5 538 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 HDAC2Q92769 488 aaKnown RBP7.75□□□□□ -1.17
SMC4-212ENST00000470240 CXorf40BQ96DE9 158 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 MTFMTQ96DP5 389 aaKnown RBP7.75□□□□□ -1.17
SMC4-212ENST00000470240 PYURFQ96I23 114 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 TSSK3Q96PN8 268 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 PANX1Q96RD7 426 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SLC46A2Q9BY10 475 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 ADNPQ9H2P0 1102 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 KAT8Q9H7Z6 458 aaKnown RBP7.75□□□□□ -1.17
SMC4-212ENST00000470240 POLR1BQ9H9Y6 1135 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 CXorf21Q9HAI6 301 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 BRF2Q9HAW0 419 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 SPHK2Q9NRA0 654 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 FARSBQ9NSD9 589 aaKnown RBP7.75□□□□□ -1.17
SMC4-212ENST00000470240 DCAF13Q9NV06 445 aaKnown RBP7.75□□□□□ -1.17
SMC4-212ENST00000470240 ATAD3AQ9NVI7 634 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 GPRC5BQ9NZH0 403 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 KIF17Q9P2E2 1029 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 DKK3Q9UBP4 350 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 VPS29Q9UBQ0 182 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 PCDHGB4Q9UN71 923 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 ERVW-1Q9UQF0 538 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 RWDD3Q9Y3V2 267 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 PCDHGB5Q9Y5G0 923 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 PLXNB3Q9ULL4 1909 aa7.75□□□□□ -1.17
SMC4-212ENST00000470240 MGAT4DA6NG13 374 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 TRIM64A6NGJ6 449 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 GFYI3L273 518 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 PLOD2O00469 737 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 FPGTO14772 594 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 ZNF821O75541 412 aaPredicted RBP7.74□□□□□ -1.17
SMC4-212ENST00000470240 RGS9O75916 674 aaPredicted RBP7.74□□□□□ -1.17
SMC4-212ENST00000470240 PRKD3O94806 890 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 ZNF682O95780 498 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 PRNPP04156 253 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 ALPLP05186 524 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 GNAO1P09471 354 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 HNRNPA1P09651 372 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMC4-212ENST00000470240 GJA1P17302 382 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 AMD1P17707 334 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 SDC1P18827 310 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 ITPKAP23677 461 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 HOXA9P31269 272 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 TMBIM6P55061 237 aa7.74□□□□□ -1.17
SMC4-212ENST00000470240 ZXDBP98169 803 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms