RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SLC4A11Q8NBS3 891 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 OR6S1Q8NH40 331 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 OR1L3Q8NH93 324 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 CENPTQ96BT3 561 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 FAM71F1Q96KD3 344 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 C18orf12Q96KH6 178 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 C10orf90Q96M02 699 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 NSMCE3Q96MG7 304 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 NECTIN4Q96NY8 510 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 CITED2Q99967 270 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 VGLL1Q99990 258 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 DESI2Q9BSY9 194 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 CABLES2Q9BTV7 478 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 FAM129AQ9BZQ8 928 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 UBXN6Q9BZV1 441 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 ZMYND12Q9H0C1 365 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 THAP2Q9H0W7 228 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 TLE6Q9H808 572 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 CDH20Q9HBT6 801 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 MAN2C1Q9NTJ4 1040 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 ASIC3Q9UHC3 531 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 WDR83OSQ9Y284 106 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 POMT1Q9Y6A1 747 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 C15orf61A6NNL5 157 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 ERI2A8K979 691 aaKnown RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 CLDN4O14493 209 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 PTGESO14684 152 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 PSMA7O14818 248 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 SLU7O95391 586 aaKnown RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 ACSL3O95573 720 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 VTNP04004 478 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 SAGP10523 405 aaPredicted RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 CD22P20273 847 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 OPRL1P41146 370 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 HUNKP57058 714 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 LPAL2Q16609 132 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 FASTKD1Q53R41 847 aaKnown RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 TCTE1Q5JU00 501 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 LYSMD4Q5XG99 296 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 C11orf88Q6PI97 169 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 LRRTM1Q86UE6 522 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 MAML2Q8IZL2 1156 aaPredicted RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 RYBPQ8N488 228 aaPredicted RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 CAMKVQ8NCB2 501 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 SETD6Q8TBK2 473 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 MAPK15Q8TD08 544 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 ZNRF4Q8WWF5 429 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 C4orf45Q96LM5 186 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 ATOH8Q96SQ7 321 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 FEVQ99581 238 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 NKX3-1Q99801 234 aaPredicted RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 CPNE1Q99829 537 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 RBM4BQ9BQ04 359 aaKnown RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 THUMPD3Q9BV44 507 aaKnown RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 Q9H8V8 135 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 SPHK2Q9NRA0 654 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 CHCHD3Q9NX63 227 aaKnown RBP3.38□□□□□ -1.87
BRCA2-202ENST00000470094 MMP24Q9Y5R2 645 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 R4GN57 208 aa3.38□□□□□ -1.87
BRCA2-202ENST00000470094 TRAV34A0A0B4J273 112 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 KPNA7A9QM74 516 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 WDR46O15213 610 aaKnown RBP3.37□□□□□ -1.87
BRCA2-202ENST00000470094 CRLF1O75462 422 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 PRKAR1AP10644 381 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 CYP2A7P20853 494 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 VAMP7P51809 220 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 GUCY2DQ02846 1103 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 SCN1BQ07699 218 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF273Q14593 569 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 SLC1A5Q15758 541 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF74Q16587 644 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 MPP7Q5T2T1 576 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 OR4A47Q6IF82 309 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 SHQ1Q6PI26 577 aaKnown RBP3.37□□□□□ -1.87
BRCA2-202ENST00000470094 PPP1R21Q6ZMI0 780 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.37□□□□□ -1.87
BRCA2-202ENST00000470094 IQUBQ8NA54 791 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 NOA1Q8NC60 698 aaKnown RBP3.37□□□□□ -1.87
BRCA2-202ENST00000470094 SLC37A3Q8NCC5 494 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 OR10Q1Q8NGQ4 319 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 GDAP1Q8TB36 358 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF519Q8TB69 540 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 AFAP1L1Q8TED9 768 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 GATAD1Q8WUU5 269 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 APOBEC4Q8WW27 367 aaKnown RBP3.37□□□□□ -1.87
BRCA2-202ENST00000470094 ROBO4Q8WZ75 1007 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 SLCO2A1Q92959 643 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF486Q96H40 463 aaPredicted RBP3.37□□□□□ -1.87
BRCA2-202ENST00000470094 MUS81Q96NY9 551 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 LPAR4Q99677 370 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 CCDC3Q9BQI4 270 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 CDK19Q9BWU1 502 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 WWTR1Q9GZV5 400 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 UPF3AQ9H1J1 476 aaKnown RBP3.37□□□□□ -1.87
BRCA2-202ENST00000470094 TBC1D7Q9P0N9 293 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 PAK5Q9P286 719 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 DNAJB9Q9UBS3 223 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 CHKBQ9Y259 395 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 LIPGQ9Y5X9 500 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms