RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 RPE65Q16518 533 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 DEFB109BQ30KR1 87 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 C1QTNF12Q5T7M4 302 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 ZNF470Q6ECI4 717 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 ESX1Q8N693 406 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 PPHLN1Q8NEY8 458 aaKnown RBP11.27□□□□□ -0.61
FAM228B-203ENST00000469867 C20orf27Q9GZN8 174 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 VPS11Q9H270 941 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 SAR1AQ9NR31 198 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.27□□□□□ -0.61
FAM228B-203ENST00000469867 TXNDC16Q9P2K2 825 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 FKBPLQ9UIM3 349 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 PLLPQ9Y342 182 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 CENPEQ02224 2701 aa11.27□□□□□ -0.61
FAM228B-203ENST00000469867 C2orf81A6NN90 581 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 TXNDC9O14530 226 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 TOX3O15405 576 aaPredicted RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CD1EP15812 388 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 TCN2P20062 427 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 MSH3P20585 1137 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 PCSK6P29122 969 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 TYK2P29597 1187 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 DLSTP36957 453 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 SLC18A1P54219 525 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 SLC25A3Q00325 362 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 TLE1Q04724 770 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 BTKQ06187 659 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 ERV3-1Q14264 604 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 RGS9BPQ6ZS82 235 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 LILRA3Q8N6C8 439 aaPredicted RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CPNE1Q99829 537 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 TSSK1BQ9BXA7 367 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 ASB8Q9H765 288 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 SSU72Q9NP77 194 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 TMEM216Q9P0N5 145 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CROTQ9UKG9 612 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 SLC39A10Q9ULF5 831 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 ZNF106Q9H2Y7 1883 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 MAGEB16A2A368 324 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 PSMD3O43242 534 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 ZNF189O75820 626 aaPredicted RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 PDE5AO76074 875 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 SRP72O76094 671 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 NELFEP18615 380 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 LPOP22079 712 aaPredicted RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 PEX2P28328 305 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 ALDH18A1P54886 795 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 DMPKQ09013 629 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 IL11RAQ14626 422 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 COLEC12Q5KU26 742 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 RBM20Q5T481 1227 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 C1orf146Q5VVC0 180 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 METRNLQ641Q3 311 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CNSTQ6PJW8 725 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CERS6Q6ZMG9 384 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 ZC3HC1Q86WB0 502 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 PPP1R3BQ86XI6 285 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CEP97Q8IW35 865 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 RBM12BQ8IXT5 1001 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 ULK2Q8IYT8 1036 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 POU5F2Q8N7G0 328 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 HDAC10Q969S8 669 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CCDC124Q96CT7 223 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CATSPER2Q96P56 530 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 MAP3K3Q99759 626 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 FAM192AQ9GZU8 254 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 TRIT1Q9H3H1 467 aaKnown RBP11.26□□□□□ -0.61
FAM228B-203ENST00000469867 BLOC1S6Q9UL45 172 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 ZNF232Q9UNY5 417 aa11.26□□□□□ -0.61
FAM228B-203ENST00000469867 CCDC160A6NGH7 325 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 TERTO14746 1132 aaKnown RBP11.25□□□□□ -0.61
FAM228B-203ENST00000469867 TM9SF1O15321 606 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 KATNA1O75449 491 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 TROVE2P10155 538 aaKnown RBP eCLIP11.25□□□□□ -0.61
FAM228B-203ENST00000469867 FOLR1P15328 257 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 SERPINB9P50453 376 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 CSRP3P50461 194 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 TUBB3Q13509 450 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 TSTD2Q5T7W7 516 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 LGSNQ5TDP6 509 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 C6orf15Q6UXA7 325 aaPredicted RBP11.25□□□□□ -0.61
FAM228B-203ENST00000469867 PRSS42Q7Z5A4 293 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 SCUBE1Q8IWY4 988 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 METTL25Q8N6Q8 603 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 C12orf66Q96MD2 445 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 EFHD1Q9BUP0 239 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 TRIM55Q9BYV6 548 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 ADNPQ9H2P0 1102 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 AKIRIN1Q9H9L7 192 aaPredicted RBP11.25□□□□□ -0.61
FAM228B-203ENST00000469867 SMOXQ9NWM0 555 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 EPHA6Q9UF33 1036 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 PCDHB3Q9Y5E6 796 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 PIKFYVEQ9Y2I7 2098 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 NOTCH2Q04721 2471 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 MROH6A6NGR9 719 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 NTRK1P04629 796 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 FURINP09958 794 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 IMPDH2P12268 514 aa11.25□□□□□ -0.61
FAM228B-203ENST00000469867 ATP6V1B1P15313 513 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms