RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SPPL3Q8TCT6 385 aa9.14□□□□□ -0.95
TOP3A-203ENST00000469739 TFAP2CQ92754 450 aa9.14□□□□□ -0.95
TOP3A-203ENST00000469739 MAL2Q969L2 176 aa9.14□□□□□ -0.95
TOP3A-203ENST00000469739 ZUFSPQ96AP4 578 aa9.14□□□□□ -0.95
TOP3A-203ENST00000469739 ECHDC3Q96DC8 303 aa9.14□□□□□ -0.95
TOP3A-203ENST00000469739 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-203ENST00000469739 ARMC1Q9NVT9 282 aa9.14□□□□□ -0.95
TOP3A-203ENST00000469739 CCDC88CQ9P219 2028 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 GNG14A0A1W2PPG7 69 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 MAGEB17A8MXT2 336 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CFAP99D6REC4 459 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 RFXANKO14593 260 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 LZTS3O60299 673 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 KDM1AO60341 852 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 GPR37L1O60883 481 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 NUDT7P0C024 238 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 HNF4AP41235 474 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 ST8SIA6P61647 398 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 TMEM115Q12893 351 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CAMK1Q14012 370 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CYP2A13Q16696 494 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 MPP7Q5T2T1 576 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 C1orf53Q5VUE5 145 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 ADGRD2Q7Z7M1 963 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CARM1Q86X55 608 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 DHRSXQ8N5I4 330 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 ZNF740Q8NDX6 193 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 FRS2Q8WU20 508 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 ASZ1Q8WWH4 475 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 IPCEF1Q8WWN9 437 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 LMLNQ96KR4 655 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 PANX1Q96RD7 426 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 REXO4Q9GZR2 422 aaKnown RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 IL36AQ9UHA7 158 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 SH2B3Q9UQQ2 575 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 TRPM6Q9BX84 2022 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 SLC28A1O00337 649 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CXCR6O00574 342 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 AQP9O43315 295 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 SULT1C4O75897 302 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 TGFB1P01137 390 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 COX7A2P14406 83 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 EN2P19622 333 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CYP2A7P20853 494 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 PSMA3P25788 255 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 TUBA4AP68366 448 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CYP4F2P78329 520 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 DOC2AQ14183 400 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 NR1D2Q14995 579 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 AASDHQ4L235 1098 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 USP39Q53GS9 565 aaKnown RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 FRG2Q64ET8 278 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 AGTRAPQ6RW13 159 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 NECAB2Q7Z6G3 386 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 VTCN1Q7Z7D3 282 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 ANKFN1Q8N957 763 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 OR4K1Q8NGD4 311 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 TBC1D15Q8TC07 691 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 STON2Q8WXE9 905 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 SH3KBP1Q96B97 665 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 EFHD2Q96C19 240 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 TPD52L3Q96J77 140 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 FRG2BQ96QU4 278 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 BARD1Q99728 777 aaKnown RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 SORBS1Q9BX66 1292 aaKnown RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 ING2Q9H160 280 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 RETREG1Q9H6L5 497 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 DNAJC11Q9NVH1 559 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CDH7Q9ULB5 785 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 CDC14AQ9UNH5 594 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 ERVK-11Q9UQG0 969 aa9.13□□□□□ -0.95
TOP3A-203ENST00000469739 PCYT1BQ9Y5K3 369 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-203ENST00000469739 ELOVL7A1L3X0 281 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 FAM221BA6H8Z2 402 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 PTGES3LE9PB15 166 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 H3BNH8 94 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SGTAO43765 313 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 HS6ST1O60243 411 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 FKBP9O95302 570 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 TNFRSF1BP20333 461 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 BMPR1AP36894 532 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 DGKEP52429 567 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 EEFSECP57772 596 aaKnown RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 PFN3P60673 137 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 KCNJ8Q15842 424 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 CES5AQ6NT32 575 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 FKBP9P1Q75LS8 142 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 THOC6Q86W42 341 aaKnown RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 C7orf61Q8IZ16 206 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 C1orf52Q8N6N3 182 aaKnown RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SMG7Q92540 1137 aaKnown RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 MCCC1Q96RQ3 725 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NELL2Q99435 816 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 C9orf16Q9BUW7 83 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SLC12A9Q9BXP2 914 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NTN4Q9HB63 628 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 SGK2Q9HBY8 427 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 TM7SF3Q9NS93 570 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 MOSPD1Q9UJG1 213 aa9.12□□□□□ -0.95
TOP3A-203ENST00000469739 NEUROG3Q9Y4Z2 214 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms