RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 STEAP4Q687X5 459 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 C16orf46Q6P387 395 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CNSTQ6PJW8 725 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 SH2D5Q6ZV89 423 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 NEK10Q6ZWH5 1172 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 KCNMB4Q86W47 210 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 TRIM42Q8IWZ5 723 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 PARP9Q8IXQ6 854 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 DSELQ8IZU8 1212 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 SLC38A9Q8NBW4 561 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 GABPB2Q8TAK5 448 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-203ENST00000468565 KCNJ9Q92806 393 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 IL17FQ96PD4 163 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CCDC68Q9H2F9 335 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 PLAC1Q9HBJ0 212 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 FBXO6Q9NRD1 293 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-203ENST00000468565 TXLNGQ9NUQ3 528 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 MKS1Q9NXB0 559 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 SPATA7Q9P0W8 599 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 FBXO5Q9UKT4 447 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 ANKRD12Q6UB98 2062 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 H3BMH7 237 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 MEN1O00255 615 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 GPR37O15354 613 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 KATNA1O75449 491 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 CREG1O75629 220 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 SNCBQ16143 134 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 SPANXN3Q5MJ09 141 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 PRAMEF17Q5VTA0 474 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 C10orf82Q8WW14 230 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 N4BP2L2Q92802 583 aaPredicted RBP13.91□□□□□ -0.18
COL27A1-203ENST00000468565 MR1Q95460 341 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 FAM111AQ96PZ2 611 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 LRRC37BQ96QE4 947 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 AKIRIN1Q9H9L7 192 aaPredicted RBP13.91□□□□□ -0.18
COL27A1-203ENST00000468565 INTS7Q9NVH2 962 aaKnown RBP13.91□□□□□ -0.18
COL27A1-203ENST00000468565 GALPQ9UBC7 116 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 CIDEBQ9UHD4 219 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 MED16Q9Y2X0 877 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 AP1M2Q9Y6Q5 423 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 BSNQ9UPA5 3926 aa13.91□□□□□ -0.18
COL27A1-203ENST00000468565 PRICKLE3O43900 615 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 FAM87AP0C7U9 286 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 NQO1P15559 274 aaKnown RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 ETV4P43268 484 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 RPS15P62841 145 aaKnown RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 ELF3P78545 371 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 NAB1Q13506 487 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 HSP90AA5PQ58FG0 334 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 ACSBG2Q5FVE4 666 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 ZNF549Q6P9A3 640 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 FAM199XQ6PEV8 388 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 GPR135Q8IZ08 494 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 CDKL2Q92772 493 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 FAM136AQ96C01 138 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 KLHL29Q96CT2 875 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 THOC1Q96FV9 657 aaKnown RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 DPH2Q9BQC3 489 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 SMYD2Q9NRG4 433 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 PCMTD2Q9NV79 361 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 TUBD1Q9UJT1 453 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 RUVBL2Q9Y230 463 aaKnown RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 MDC1Q14676 2089 aaKnown RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 CFAP46Q8IYW2 2715 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 PSIP1O75475 530 aaKnown RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 RAB40ALP0C0E4 278 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 MAGP20916 626 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 PTPN4P29074 926 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 POLE2P56282 527 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 MPP1Q00013 466 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 ERV3-1Q14264 604 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 CCSMST1Q4G0I0 132 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 TBC1D1Q86TI0 1168 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 SYVN1Q86TM6 617 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 CNTN4Q8IWV2 1026 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 C2CD4AQ8NCU7 369 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 TRIM55Q9BYV6 548 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 SLC7A5P2Q9GIP4 190 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 CHST8Q9H2A9 424 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 ACTL8Q9H568 366 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
COL27A1-203ENST00000468565 MOCS1Q9NZB8 636 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 PLCL2Q9UPR0 1127 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 DHRS7Q9Y394 339 aa13.9□□□□□ -0.18
COL27A1-203ENST00000468565 TLN1Q9Y490 2541 aaKnown RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 EIF3FO00303 357 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 ZNF749O43361 778 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 MGRN1O60291 552 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 OR2B3O76000 313 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 HAUS5O94927 633 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 F7P08709 466 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 MPC1LP0DKB6 136 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 ERGP11308 486 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 ENO3P13929 434 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 SERPINB4P48594 390 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 SF1Q15637 639 aaKnown RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 CYP2A13Q16696 494 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 DEFB110Q30KQ9 67 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms