RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 HEXBP07686 556 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 HOXB4P17483 251 aaPredicted RBP11.53□□□□□ -0.56
UBR4-211ENST00000467272 RPS3P23396 243 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBR4-211ENST00000467272 ADRA1DP25100 572 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 CD96P40200 585 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 CCNFP41002 786 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 BDKRB1P46663 353 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 CSNK1G2P78368 415 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 TLE4Q04727 773 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 ZNF33BQ06732 778 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 CDH17Q12864 832 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 FAM53BQ14153 422 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 SYT16Q17RD7 645 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 RNFT1Q5M7Z0 435 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 CCDC181Q5TID7 509 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 ABHD17BQ5VST6 288 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 FAAH2Q6GMR7 532 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 LRRC8BQ6P9F7 803 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 PCGF5Q86SE9 256 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 LINC00523Q86TU6 105 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 DOLPP1Q86YN1 238 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 BEST3Q8N1M1 668 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 CSNK1A1LQ8N752 337 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 BIRC8Q96P09 236 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 CYTH2Q99418 400 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 ANP32EQ9BTT0 268 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 HES7Q9BYE0 225 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 VN1R1Q9GZP7 353 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 TNFRSF10DQ9UBN6 386 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 RUVBL2Q9Y230 463 aaKnown RBP11.53□□□□□ -0.56
UBR4-211ENST00000467272 PCDHA13Q9Y5I0 950 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 E9PLN8 166 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 MYO1CO00159 1063 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 NEURL1O76050 574 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 EIF2S1P05198 315 aaKnown RBP11.52□□□□□ -0.57
UBR4-211ENST00000467272 C8orf89P0DMQ9 161 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 MYBL2P10244 700 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 ATP5DP30049 168 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 CASP6P55212 293 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 RWDD2BP57060 319 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 TFF3Q07654 80 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 NAA25Q14CX7 972 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.52□□□□□ -0.57
UBR4-211ENST00000467272 LDB1Q86U70 411 aaPredicted RBP11.52□□□□□ -0.57
UBR4-211ENST00000467272 ZNF227Q86WZ6 799 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 LRRC56Q8IYG6 542 aaPredicted RBP11.52□□□□□ -0.57
UBR4-211ENST00000467272 TC2NQ8N9U0 490 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 SUN3Q8TAQ9 357 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 CABS1Q96KC9 395 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 ALS2CR12Q96Q35 445 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 TTC1Q99614 292 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 VKORC1Q9BQB6 163 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 TMUB1Q9BVT8 246 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 TSSK1BQ9BXA7 367 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 TRIM45Q9H8W5 580 aaPredicted RBP11.52□□□□□ -0.57
UBR4-211ENST00000467272 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 TREX1Q9NSU2 369 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 TEKT2Q9UIF3 430 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 TTC7AQ9ULT0 858 aaPredicted RBP11.52□□□□□ -0.57
UBR4-211ENST00000467272 MRFAP1Q9Y605 127 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 DUSP10Q9Y6W6 482 aa11.52□□□□□ -0.57
UBR4-211ENST00000467272 A0A0A6YYC8 382 aaPredicted RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 IGHV3-20A0A0C4DH32 117 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 TCRBV7S2A1N4TA0A589 114 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 BTNL10A8MVZ5 291 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 I3L1I5 382 aaPredicted RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 CDK2AP1O14519 115 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 ASNA1O43681 348 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 ESRRAP11474 423 aaPredicted RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 EZRP15311 586 aaKnown RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 ARNTP27540 789 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 CMPK1P30085 196 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 MAT1AQ00266 395 aaKnown RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 PRDX1Q06830 199 aaKnown RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 ARHGAP19Q14CB8 494 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 TMED2Q15363 201 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 CTSL3PQ5NE16 218 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 LANCL3Q6ZV70 420 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 CPEB2Q7Z5Q1 589 aaKnown RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 LRRC6Q86X45 466 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 CRLF3Q8IUI8 442 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 CNGA4Q8IV77 575 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 CEP97Q8IW35 865 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 MARVELD2Q8N4S9 558 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 AGAP11Q8TF27 550 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 MMABQ96EY8 250 aaPredicted RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 MAGED4Q96JG8 741 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 CALR3Q96L12 384 aaKnown RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 ZNF354BQ96LW1 612 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 DRC3Q9H069 523 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 CXXC4Q9H2H0 198 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 NPDC1Q9NQX5 325 aaPredicted RBP11.51□□□□□ -0.57
UBR4-211ENST00000467272 TCAF1Q9Y4C2 921 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 HRH3Q9Y5N1 445 aa11.51□□□□□ -0.57
UBR4-211ENST00000467272 ARHGEF33A8MVX0 844 aa11.5□□□□□ -0.57
UBR4-211ENST00000467272 AKR1B15C9JRZ8 316 aaPredicted RBP11.5□□□□□ -0.57
UBR4-211ENST00000467272 H0YIG0 161 aa11.5□□□□□ -0.57
UBR4-211ENST00000467272 KPNA5O15131 536 aa11.5□□□□□ -0.57
UBR4-211ENST00000467272 ZNHIT1O43257 154 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms