RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 FBXL8Q96CD0 374 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 DTNBP1Q96EV8 351 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 CCDC138Q96M89 665 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 FERD3LQ96RJ6 166 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 OSBPL11Q9BXB4 747 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 TRIM15Q9C019 465 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 TRNAU1APQ9NX07 287 aaKnown RBP17.99■□□□□ 0.47
CAPN3-209ENST00000466222 PTTG2Q9NZH5 202 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 OPTCQ9UBM4 332 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 TMCO1Q9UM00 188 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 TIMM22Q9Y584 194 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 PTGDR2Q9Y5Y4 395 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 K7EPI3 171 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 WDR47O94967 919 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 TCN1P20061 433 aaPredicted RBP17.98■□□□□ 0.47
CAPN3-209ENST00000466222 TSTA3Q13630 321 aaPredicted RBP17.98■□□□□ 0.47
CAPN3-209ENST00000466222 RPE65Q16518 533 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 UGT3A2Q3SY77 523 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 PRRT3Q5FWE3 981 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 LETMD1Q6P1Q0 360 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 UNC5DQ6UXZ4 953 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 SATL1Q86VE3 508 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 ABCA7Q8IZY2 2146 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 OR9A1PQ8NGU1 263 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 CNBD2Q96M20 576 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 KLHL33A6NCF5 533 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 PRORSD1PA6NEY8 169 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 CLGNO14967 610 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 PRAMEF4O60810 478 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 OR4F21O95013 312 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 TFAP2AP05549 437 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 JUNDP17535 347 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 GPX3P22352 226 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 ARL1P40616 181 aaPredicted RBP17.98■□□□□ 0.47
CAPN3-209ENST00000466222 HNMTP50135 292 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 TXNL4AP83876 142 aaKnown RBP17.98■□□□□ 0.47
CAPN3-209ENST00000466222 MYBPC1Q00872 1141 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 APOFQ13790 326 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 PRAMEF9Q5VWM5 478 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 BORAQ6PGQ7 559 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 SYTL1Q8IYJ3 562 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 TSPEARQ8WU66 669 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 UBTD2Q8WUN7 234 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 OR4K3Q96R72 315 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 LRRC61Q9BV99 259 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 XKR8Q9H6D3 395 aa17.98■□□□□ 0.47
CAPN3-209ENST00000466222 ZNF624Q9P2J8 865 aaPredicted RBP17.98■□□□□ 0.47
CAPN3-209ENST00000466222 APOBEC3BQ9UH17 382 aaKnown RBP17.98■□□□□ 0.47
CAPN3-209ENST00000466222 SDK1Q7Z5N4 2213 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 A6NCN8 305 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 BCAT2O15382 392 aaPredicted RBP17.97■□□□□ 0.47
CAPN3-209ENST00000466222 KCNJ13O60928 360 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 MRPL19P49406 292 aaKnown RBP17.97■□□□□ 0.47
CAPN3-209ENST00000466222 YBX1P67809 324 aaKnown RBP17.97■□□□□ 0.47
CAPN3-209ENST00000466222 FOXM1Q08050 763 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 ILF3Q12906 894 aaKnown RBP eCLIP17.97■□□□□ 0.47
CAPN3-209ENST00000466222 CDKL4Q5MAI5 379 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 KANK2Q63ZY3 851 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 EFL1Q7Z2Z2 1120 aaKnown RBP17.97■□□□□ 0.47
CAPN3-209ENST00000466222 DHFR2Q86XF0 187 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 FBXL6Q8N531 539 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 FBXO15Q8NCQ5 510 aaPredicted RBP17.97■□□□□ 0.47
CAPN3-209ENST00000466222 FAM156AQ8NDB6 213 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 OR4F6Q8NGB9 312 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 GPBAR1Q8TDU6 330 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 GAB3Q8WWW8 586 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 MENTQ9BUN1 341 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 SLC32A1Q9H598 525 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 ARMC1Q9NVT9 282 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 ANGPTL3Q9Y5C1 460 aa17.97■□□□□ 0.47
CAPN3-209ENST00000466222 AZIN1O14977 448 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 CTSEP14091 401 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 PIK3CGP48736 1102 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 NXPH1P58417 271 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 TAP2Q03519 686 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 BNIP2Q12982 314 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 TRAF3Q13114 568 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 PLK5Q496M5 336 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 WDR45BQ5MNZ6 344 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 C6orf10Q5SRN2 563 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 PMS2CLQ68D20 193 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 ABRAXAS1Q6UWZ7 409 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 TAF8Q7Z7C8 310 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 DCUN1D3Q8IWE4 304 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 CHERPQ8IWX8 916 aaKnown RBP17.96■□□□□ 0.47
CAPN3-209ENST00000466222 MIER2Q8N344 545 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 GALNT4Q8N4A0 578 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 CDYL2Q8N8U2 506 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 ANKFN1Q8N957 763 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 GPATCH1Q9BRR8 931 aaKnown RBP17.96■□□□□ 0.47
CAPN3-209ENST00000466222 HAUS8Q9BT25 410 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 PCDHAC1Q9H158 963 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 TRIT1Q9H3H1 467 aaKnown RBP17.96■□□□□ 0.47
CAPN3-209ENST00000466222 FSCN3Q9NQT6 498 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 TAAR2Q9P1P5 351 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 ABCD2Q9UBJ2 740 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 DNAJC15Q9Y5T4 150 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 A0A1B0GVT2 93 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 AQP12BA6NM10 295 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 SDC3O75056 442 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms