RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 OR10G8Q8NGN5 311 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 OR1L3Q8NH93 324 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 OCC1Q8TAD7 63 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 HCAR2Q8TDS4 363 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 SLC26A7Q8TE54 656 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 P2RX5Q93086 422 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 TSACCQ96A04 125 aaPredicted RBP3.76□□□□□ -1.81
LRCH3-211ENST00000466054 CENPTQ96BT3 561 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 C10orf90Q96M02 699 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 FUCA2Q9BTY2 467 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 THAP2Q9H0W7 228 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 SDCBP2Q9H190 292 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 WDR13Q9H1Z4 485 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 P2RY12Q9H244 342 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 SNX25Q9H3E2 840 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 ATP13A3Q9H7F0 1226 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 FGF22Q9HCT0 170 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 CHCHD3Q9NX63 227 aaKnown RBP3.76□□□□□ -1.81
LRCH3-211ENST00000466054 RNF186Q9NXI6 227 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 R4GN57 208 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 MYH14Q7Z406 1995 aaKnown RBP3.76□□□□□ -1.81
LRCH3-211ENST00000466054 TRAV34A0A0B4J273 112 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 TRBV5-5A0A0J9YX44 114 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 A0A1W2PRQ8 180 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 H0YAE9 185 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 EXTL3O43909 919 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 PGLSO95336 258 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 C9P02748 559 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 HSP90AB1P08238 724 aaKnown RBP3.75□□□□□ -1.81
LRCH3-211ENST00000466054 VIMP08670 466 aaKnown RBP3.75□□□□□ -1.81
LRCH3-211ENST00000466054 CETN2P41208 172 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 GSDMDP57764 484 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 SNRPD1P62314 119 aaKnown RBP3.75□□□□□ -1.81
LRCH3-211ENST00000466054 ROR1Q01973 937 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 CACNG1Q06432 222 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 SCN1BQ07699 218 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 TNK1Q13470 666 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 SCARB2Q14108 478 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 NONOQ15233 471 aaKnown RBP eCLIP3.75□□□□□ -1.81
LRCH3-211ENST00000466054 RBBP7Q16576 425 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 CTU2Q2VPK5 515 aaKnown RBP3.75□□□□□ -1.81
LRCH3-211ENST00000466054 ADAMTSL4-AS1Q5T5F5 129 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 SLC25A47Q6Q0C1 308 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 MSANTD1Q6ZTZ1 278 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 GALNTL5Q7Z4T8 443 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 GLRX5Q86SX6 157 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 FAM219AQ8IW50 185 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 ADAD2Q8NCV1 583 aaKnown RBP3.75□□□□□ -1.81
LRCH3-211ENST00000466054 ZNRF4Q8WWF5 429 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 CDCA3Q99618 268 aaPredicted RBP3.75□□□□□ -1.81
LRCH3-211ENST00000466054 CITED2Q99967 270 aaPredicted RBP3.75□□□□□ -1.81
LRCH3-211ENST00000466054 ADPGKQ9BRR6 497 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 SH3GLB2Q9NR46 395 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 KCNK7Q9Y2U2 307 aa3.75□□□□□ -1.81
LRCH3-211ENST00000466054 IGSF1Q8N6C5 1336 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 IFIT3O14879 490 aaKnown RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 SEC24AO95486 1093 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 RPN1P04843 607 aaKnown RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 ZFYP08048 801 aaPredicted RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 FAM58BPP0C7Q3 252 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 SLC2A2P11168 524 aaPredicted RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 CASTP20810 708 aaKnown RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 CRKLP46109 303 aaKnown RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 CDX1P47902 265 aaPredicted RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 GMPSP49915 693 aaPredicted RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 SULT2A1Q06520 285 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 OPCMLQ14982 345 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 GPR33Q49SQ1 333 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 HECTD3Q5T447 861 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 SUSD4Q5VX71 490 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 TXNRD3NBQ6F5E7 133 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 PWWP2BQ6NUJ5 590 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 CAVIN1Q6NZI2 390 aaKnown RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 CTR9Q6PD62 1173 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 FIP1L1Q6UN15 594 aaKnown RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 DZIP1Q86YF9 867 aaKnown RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 LACC1Q8IV20 430 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 C4orf19Q8IY42 314 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 RCOR2Q8IZ40 523 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 RAB42Q8N4Z0 105 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 FAM89BQ8N5H3 189 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 ZNF248Q8NDW4 579 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 GPRC5AQ8NFJ5 357 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 OR7A2PQ8NGA2 310 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 HEXDCQ8WVB3 486 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 METTL21AQ8WXB1 218 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 PIK3R3Q92569 461 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 ARHGAP45Q92619 1136 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 MAGED4Q96JG8 741 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 LPAR4Q99677 370 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 NKX3-1Q99801 234 aaPredicted RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 CCDC3Q9BQI4 270 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 THUMPD3Q9BV44 507 aaKnown RBP3.74□□□□□ -1.81
LRCH3-211ENST00000466054 ZWILCHQ9H900 591 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 LMAN1LQ9HAT1 526 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 MAN2C1Q9NTJ4 1040 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 PKD2L2Q9NZM6 624 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 EPHA6Q9UF33 1036 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 WDR37Q9Y2I8 494 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms