RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 OR2A25A4D2G3 310 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 H7BY64 318 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 RFPL1O75677 317 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 EIF2S1P05198 315 aaKnown RBP16.31■□□□□ 0.2
VPS52-215ENST00000464425 ENO2P09104 434 aaPredicted RBP16.31■□□□□ 0.2
VPS52-215ENST00000464425 COL6A2P12110 1019 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 ALAS2P22557 587 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 GMPRP36959 345 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 AP1S2P56377 157 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 ATP6V0D1P61421 351 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 ABATP80404 500 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 RHDQ02161 417 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 NAA25Q14CX7 972 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 TSNQ15631 228 aaKnown RBP16.31■□□□□ 0.2
VPS52-215ENST00000464425 ZXDCQ2QGD7 858 aaPredicted RBP16.31■□□□□ 0.2
VPS52-215ENST00000464425 TAF1BQ53T94 588 aaPredicted RBP16.31■□□□□ 0.2
VPS52-215ENST00000464425 WASHC2DQ5SRD0 308 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 ATP1A1-AS1Q5TC04 95 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 PRAMEF13Q5VWM6 474 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 ZNF517Q6ZMY9 492 aaPredicted RBP16.31■□□□□ 0.2
VPS52-215ENST00000464425 TBC1D1Q86TI0 1168 aaPredicted RBP16.31■□□□□ 0.2
VPS52-215ENST00000464425 PAQR7Q86WK9 346 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 OR4N4Q8N0Y3 316 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 MZB1Q8WU39 189 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 PYCR2Q96C36 320 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 CABS1Q96KC9 395 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 PRAP1Q96NZ9 151 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 NDC1Q9BTX1 674 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 CTNNAL1Q9UBT7 734 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 TBK1Q9UHD2 729 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 SNX7Q9UNH6 387 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 NOVA2Q9UNW9 492 aaKnown RBP16.31■□□□□ 0.2
VPS52-215ENST00000464425 C21orf140B9A014 251 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 SRPX2O60687 465 aaPredicted RBP16.3■□□□□ 0.2
VPS52-215ENST00000464425 LTA4HP09960 611 aaKnown RBP16.3■□□□□ 0.2
VPS52-215ENST00000464425 CD1DP15813 335 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 AGXTP21549 392 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 SLCO1A2P46721 670 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 RPS18P62269 152 aaKnown RBP16.3■□□□□ 0.2
VPS52-215ENST00000464425 RPS15P62841 145 aaKnown RBP16.3■□□□□ 0.2
VPS52-215ENST00000464425 ERV3-1Q14264 604 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 TCTE1Q5JU00 501 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 FAM69BQ5VUD6 431 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 ZNF425Q6IV72 752 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 CAPN13Q6MZZ7 669 aaPredicted RBP16.3■□□□□ 0.2
VPS52-215ENST00000464425 RHBDD2Q6NTF9 364 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 LRIG3Q6UXM1 1119 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 RNF44Q7L0R7 432 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 CROCCP2Q86T23 111 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 ACMSDQ8TDX5 336 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 EXTL1Q92935 676 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 FBXL8Q96CD0 374 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 BBC3Q96PG8 261 aaPredicted RBP16.3■□□□□ 0.2
VPS52-215ENST00000464425 UBL7Q96S82 380 aaPredicted RBP16.3■□□□□ 0.2
VPS52-215ENST00000464425 ZFYVE21Q9BQ24 234 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 PCBD2Q9H0N5 130 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 ACTL8Q9H568 366 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 NMRAL1Q9HBL8 299 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 TXLNGQ9NUQ3 528 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 ANKMY1Q9P2S6 941 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 NDOR1Q9UHB4 597 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 LGALS13Q9UHV8 139 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 SH2B3Q9UQQ2 575 aa16.3■□□□□ 0.2
VPS52-215ENST00000464425 FARSAQ9Y285 508 aaKnown RBP16.3■□□□□ 0.2
VPS52-215ENST00000464425 TLDC2A0PJX2 215 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 H0YGG7 62 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 KLHL2O95198 593 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 PTPN4P29074 926 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 ARF3P61204 181 aaPredicted RBP16.29■□□□□ 0.2
VPS52-215ENST00000464425 NFKB2Q00653 900 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 MC1RQ01726 317 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 ZNF844Q08AG5 666 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 CDC20Q12834 499 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 CSHL1Q14406 222 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 GRM7Q14831 915 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 SLC9A5Q14940 896 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 TBR1Q16650 682 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 PPP1R3AQ16821 1122 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 FAM83EQ2M2I3 478 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 SOWAHCQ53LP3 525 aaPredicted RBP16.29■□□□□ 0.2
VPS52-215ENST00000464425 ZNF385CQ66K41 422 aaPredicted RBP16.29■□□□□ 0.2
VPS52-215ENST00000464425 PCSK4Q6UW60 755 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 TTLL10Q6ZVT0 673 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 LCA5Q86VQ0 697 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 PLD3Q8IV08 490 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 CENPLQ8N0S6 344 aaPredicted RBP16.29■□□□□ 0.2
VPS52-215ENST00000464425 CYP4X1Q8N118 509 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 ENDOVQ8N8Q3 282 aaKnown RBP16.29■□□□□ 0.2
VPS52-215ENST00000464425 TTC29Q8NA56 475 aaPredicted RBP16.29■□□□□ 0.2
VPS52-215ENST00000464425 TTC9Q92623 222 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 KIAA1191Q96A73 305 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 ZNF285Q96NJ3 590 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 EGFL8Q99944 293 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 SGPP1Q9BX95 441 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 GPR87Q9BY21 358 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 SYNPO2LQ9H987 977 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 IGSF5Q9NSI5 407 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 SRPK3Q9UPE1 567 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 PCDHGA6Q9Y5G7 932 aa16.29■□□□□ 0.2
VPS52-215ENST00000464425 CDC14CA4D256 554 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms