RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 C11orf63Q6NUN7 778 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 FBXO42Q6P3S6 717 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 TMEM205Q6UW68 189 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 BEST3Q8N1M1 668 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 CSNK1A1LQ8N752 337 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 AMER3Q8N944 861 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 FAM71DQ8N9W8 422 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 OR13J1Q8NGT2 312 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 OR4L1Q8NH43 312 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 AGAP11Q8TF27 550 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 IMMP1LQ96LU5 166 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 ACAT2Q9BWD1 397 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 ENKD1Q9H0I2 346 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 RRAGDQ9NQL2 400 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-224ENST00000464148 ANKRD10Q9NXR5 420 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 RUVBL1Q9Y265 456 aaKnown RBP12.6□□□□□ -0.39
MRPL55-224ENST00000464148 EFR3BQ9Y2G0 817 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 PCDHGB6Q9Y5F9 930 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 NFS1Q9Y697 457 aa12.6□□□□□ -0.39
MRPL55-224ENST00000464148 MAP1AP78559 2803 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-224ENST00000464148 A0A0A6YYC8 382 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-224ENST00000464148 OR2A25A4D2G3 310 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 I3L1I5 382 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-224ENST00000464148 TJP3O95049 919 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 C1orf105O95561 183 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 CD46P15529 392 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 CETN2P41208 172 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 ART1P52961 327 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 YBX1P67809 324 aaKnown RBP12.59□□□□□ -0.39
MRPL55-224ENST00000464148 PRAMEP78395 509 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 TUBA3CQ13748 450 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 SYT16Q17RD7 645 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 P3H1Q32P28 736 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 ACER2Q5QJU3 275 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 PTRHD1Q6GMV3 140 aaKnown RBP12.59□□□□□ -0.39
MRPL55-224ENST00000464148 LRRC8BQ6P9F7 803 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 TUBA3EQ6PEY2 450 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 LINC00523Q86TU6 105 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 OR52K1Q8NGK4 314 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 HMGCLL1Q8TB92 370 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 RERGQ96A58 199 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-224ENST00000464148 SDCCAG3Q96C92 435 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 FOPNLQ96NB1 174 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 SIGLEC12Q96PQ1 595 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 UTP23Q9BRU9 249 aaKnown RBP12.59□□□□□ -0.39
MRPL55-224ENST00000464148 HES7Q9BYE0 225 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 DRC3Q9H069 523 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 COQ3Q9NZJ6 369 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 SLC2A6Q9UGQ3 507 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 ANAPC5Q9UJX4 755 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 RUVBL2Q9Y230 463 aaKnown RBP12.59□□□□□ -0.39
MRPL55-224ENST00000464148 PCDHA3Q9Y5H8 950 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 CACNA1CQ13936 2221 aa12.59□□□□□ -0.39
MRPL55-224ENST00000464148 IGHV3-20A0A0C4DH32 117 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 ZNHIT1O43257 154 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 ASNA1O43681 348 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 PHF2O75151 1096 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 TSPAN12O95859 305 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 CTNNA1P35221 906 aaKnown RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 PTPN7P35236 360 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 CCNFP41002 786 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 ST13P50502 369 aaKnown RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 CDH17Q12864 832 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 SEMA3AQ14563 771 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 OR1C1Q15619 314 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 AARS2Q5JTZ9 985 aaKnown RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 TSTD2Q5T7W7 516 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 GARNL3Q5VVW2 1013 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 C3P1Q6ZMU1 363 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 LDB1Q86U70 411 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 ZC3H7AQ8IWR0 971 aaKnown RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 EID3Q8N140 333 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 TMEM178AQ8NBL3 297 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 FAM98AQ8NCA5 519 aaKnown RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 MDS2Q8NDY4 140 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 MAGEC3Q8TD91 643 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 PHF10Q8WUB8 498 aaKnown RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 PANX3Q96QZ0 392 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 KCNK13Q9HB14 408 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 MRPS30Q9NP92 439 aaKnown RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 C19orf25Q9UFG5 118 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 TSR3Q9UJK0 312 aaKnown RBP12.58□□□□□ -0.4
MRPL55-224ENST00000464148 PPT2Q9UMR5 302 aa12.58□□□□□ -0.4
MRPL55-224ENST00000464148 A0A1W2PPV9 198 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 SOWAHDA6NJG2 315 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 E9PLN8 166 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 PRRG2O14669 202 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 PRMT5O14744 637 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-224ENST00000464148 KPNA5O15131 536 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 ZSCAN12O43309 604 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 RPA3P35244 121 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-224ENST00000464148 CD96P40200 585 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 AVPR1BP47901 424 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 MAT1AQ00266 395 aaKnown RBP12.57□□□□□ -0.4
MRPL55-224ENST00000464148 HSF1Q00613 529 aa12.57□□□□□ -0.4
MRPL55-224ENST00000464148 OC90Q02509 493 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-224ENST00000464148 FASTKQ14296 549 aaKnown RBP12.57□□□□□ -0.4
MRPL55-224ENST00000464148 MEP1AQ16819 746 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms