RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 OTX2P32243 289 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 MAGEA4P43358 317 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 CAV1Q03135 178 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 CKAP4Q07065 602 aaKnown RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 ATP1A4Q13733 1029 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 PPP1R3AQ16821 1122 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 WHAMMP3Q1A5X7 153 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 FAM214AQ32MH5 1076 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 YOD1Q5VVQ6 348 aaPredicted RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 PRAMEF13Q5VWM6 474 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 C8orf74Q6P047 294 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 CYS1Q717R9 158 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 OVCH1Q7RTY7 1134 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 ADCK2Q7Z695 626 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 ARHGEF39Q8N4T4 335 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 TTC29Q8NA56 475 aaPredicted RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 NOA1Q8NC60 698 aaKnown RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 C17orf62Q9BQA9 187 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 SGPP1Q9BX95 441 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 ZDHHC18Q9NUE0 388 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 CTSFQ9UBX1 484 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 RUVBL1Q9Y265 456 aaKnown RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 P2RX6O15547 441 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 SUV39H1O43463 412 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 RFPL1O75677 317 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 FAM155BO75949 473 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 CCNDBP1O95273 360 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 WISP3O95389 354 aaPredicted RBP12.37□□□□□ -0.43
XRN1-203ENST00000463916 GUCA1CO95843 209 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 HIST1H2AGP0C0S8 130 aaPredicted RBP12.37□□□□□ -0.43
XRN1-203ENST00000463916 EZRP15311 586 aaKnown RBP12.37□□□□□ -0.43
XRN1-203ENST00000463916 HIST1H2ADP20671 130 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 CCL11P51671 97 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 SSPNQ14714 243 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 NAA25Q14CX7 972 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 NKG7Q16617 165 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 UBAP2Q5T6F2 1119 aaKnown RBP12.37□□□□□ -0.43
XRN1-203ENST00000463916 PRICKLE2Q7Z3G6 844 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 SPATA6LQ8N4H0 392 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 CSNK1A1LQ8N752 337 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 HIST1H2AHQ96KK5 128 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 OR4K3Q96R72 315 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 HIST1H2AJQ99878 128 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 MACROD1Q9BQ69 325 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 H2AFJQ9BTM1 129 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 UNKQ9C0B0 810 aaKnown RBP12.37□□□□□ -0.43
XRN1-203ENST00000463916 DMGDHQ9UI17 866 aaKnown RBP12.37□□□□□ -0.43
XRN1-203ENST00000463916 PADI2Q9Y2J8 665 aa12.37□□□□□ -0.43
XRN1-203ENST00000463916 NPEPPSL1A6NEC2 478 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 GMPRP36959 345 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 FOLR3P41439 243 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 CSNK1G2P78368 415 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 GUCY2DQ02846 1103 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 RELAQ04206 551 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 KBTBD12Q3ZCT8 623 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 PPP1R32Q7Z5V6 425 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 MRGPREQ86SM8 312 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 SHISA5Q8N114 240 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 OR56A3Q8NH54 315 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 PTERQ96BW5 349 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 SPSB2Q99619 263 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 MESP1Q9BRJ9 268 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 PHACTR1Q9C0D0 580 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 TMEM184CQ9NVA4 438 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 NSMCE4AQ9NXX6 385 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 TNRC6AQ8NDV7 1962 aaKnown RBP12.36□□□□□ -0.43
XRN1-203ENST00000463916 FEZF1A0PJY2 475 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 MKRN2OSH3BPM6 223 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 SLC28A2O43868 658 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 LCMT2O60294 686 aaKnown RBP12.36□□□□□ -0.43
XRN1-203ENST00000463916 AP1S2P56377 157 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 VN1R4Q7Z5H5 301 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 FBF1Q8TES7 1133 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 FKBP10Q96AY3 582 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 CABS1Q96KC9 395 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 RBBP8Q99708 897 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 CPNE1Q99829 537 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 SLC26A1Q9H2B4 701 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 SOX17Q9H6I2 414 aaPredicted RBP12.36□□□□□ -0.43
XRN1-203ENST00000463916 GPAMQ9HCL2 828 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 ACSS2Q9NR19 701 aa12.36□□□□□ -0.43
XRN1-203ENST00000463916 MRPS2Q9Y399 296 aaKnown RBP12.36□□□□□ -0.43
XRN1-203ENST00000463916 A6NL46 340 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 VSTM2BA6NLU5 285 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 FFAR3O14843 346 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 GPR42O15529 346 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 PHGDHO43175 533 aaKnown RBP12.35□□□□□ -0.43
XRN1-203ENST00000463916 FOXS1O43638 330 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 ALBP02768 609 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 CDH1P12830 882 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 EFTUD2Q15029 972 aaKnown RBP eCLIP12.35□□□□□ -0.434e-15■■■□□ 19.1
XRN1-203ENST00000463916 TSNQ15631 228 aaKnown RBP12.35□□□□□ -0.43
XRN1-203ENST00000463916 MUM1Q2TAK8 710 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 LACTB2Q53H82 288 aaPredicted RBP12.35□□□□□ -0.43
XRN1-203ENST00000463916 TCTN3Q6NUS6 607 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 LCTLQ6UWM7 567 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 C17orf64Q86WR6 236 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 CTAGE3PQ8IX95 158 aa12.35□□□□□ -0.43
XRN1-203ENST00000463916 MMGT1Q8N4V1 131 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms