RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SCAMP1O15126 338 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 HEXIM1O94992 359 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SLU7O95391 586 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PIGNO95427 931 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ATP5BP06576 529 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 IL6RP08887 468 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CCNB1P14635 433 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DESP17661 470 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CHRNA3P32297 505 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SLC8A1P32418 973 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 HTR7P34969 479 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PAFAH1B1P43034 410 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 FNTAP49354 379 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CARSP49589 748 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SERPINH1P50454 418 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PLK1P53350 603 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 VSNL1P62760 191 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 IFI35P80217 286 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DR1Q01658 176 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CKAP4Q07065 602 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 IL10RBQ08334 325 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TRAF2Q12933 501 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PTK6Q13882 451 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 FASTKD3Q14CZ7 662 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CST6Q15828 149 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 IGFBP7Q16270 282 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 POM121L1PQ3SYA9 428 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PARP15Q460N3 678 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ODF2Q5BJF6 829 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MTX3Q5HYI7 312 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 LRRC73Q5JTD7 316 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ANKRD20A2Q5SQ80 823 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ANKRD20A1Q5TYW2 823 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ANKRD20A3Q5VUR7 823 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ICE2Q659A1 982 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DUPD1Q68J44 220 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SUMO4Q6EEV6 95 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 RGS7BPQ6MZT1 257 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 C22orf39Q6P5X5 142 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 KDELC1Q6UW63 502 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF66Q6ZN08 573 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SETD3Q86TU7 594 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF354CQ86Y25 554 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CDKL3Q8IVW4 592 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MPP5Q8N3R9 675 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ARL14Q8N4G2 192 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 AADATQ8N5Z0 425 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TEX26Q8N6G2 289 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SCARB1Q8WTV0 552 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TFB1MQ8WVM0 346 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TADA1Q96BN2 335 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ATXN7L3BQ96GX2 97 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 APOLD1Q96LR9 279 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SPATA13Q96N96 652 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 QTRT1Q9BXR0 403 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MAGEH1Q9H213 219 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ZDHHC18Q9NUE0 388 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 RBM22Q9NW64 420 aaKnown RBP eCLIP3.56□□□□□ -1.842e-7■■■■□ 25.7
SCFD1-204ENST00000463622 PCYOX1Q9UHG3 505 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 FAM153AQ9UHL3 310 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SARDHQ9UL12 918 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ERVW-1Q9UQF0 538 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF148Q9UQR1 794 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TTLL3Q9Y4R7 772 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 NBASA2RRP1 2371 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CEP192Q8TEP8 1941 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ITPR2Q14571 2701 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 FBN2P35556 2912 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MYLKQ15746 1914 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 EME2A4GXA9 379 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 C5orf60A6NFR6 353 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ARHGAP42A6NI28 874 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PRAMEF26H0Y7S4 382 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CCDC188H7C350 402 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 QSOX1O00391 747 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MID1O15344 667 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 RNASEH1O60930 286 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SDC3O75056 442 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 AVILO75366 819 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TCEA3O75764 348 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 RNASEH2AO75792 299 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PIAS2O75928 621 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TNFSF15O95150 251 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 AGTP01019 485 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TUBB4AP04350 444 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GRPP07492 148 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ITGA2BP08514 1039 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PRR35P0CG20 571 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 THEGLP0DJG4 465 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CCNCP24863 283 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CA5AP35218 305 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SERPINB6P35237 376 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ADRA1AP35348 466 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MMP13P45452 471 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 NR2C2P49116 596 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 NEK2P51955 445 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ITGA8P53708 1063 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ADPRHP54922 357 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 RIPPLY3P57055 190 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 EEFSECP57772 596 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms