RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 PHKG1Q16816 387 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 DUOXA1Q1HG43 343 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 ODF4Q2M2E3 257 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 EEF1A1P5Q5VTE0 462 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 CES4AQ5XG92 561 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 OR4A47Q6IF82 309 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 C8orf82Q6P1X6 216 aaPredicted RBP5.36□□□□□ -1.55
COPS3-205ENST00000463097 FUT10Q6P4F1 479 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 KDELC1Q6UW63 502 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 GFRALQ6UXV0 394 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 SLC24A4Q8NFF2 622 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 GGHQ92820 318 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 CDCA5Q96FF9 252 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 TMEM19Q96HH6 336 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 ZMYND12Q9H0C1 365 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 RIMS4Q9H426 269 aaPredicted RBP5.36□□□□□ -1.55
COPS3-205ENST00000463097 AATFQ9NY61 560 aaKnown RBP eCLIP5.36□□□□□ -1.55
COPS3-205ENST00000463097 DONSONQ9NYP3 566 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 SMARCAL1Q9NZC9 954 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 ZNF224Q9NZL3 707 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 KCNS2Q9ULS6 477 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 IKBKGQ9Y6K9 419 aa5.36□□□□□ -1.55
COPS3-205ENST00000463097 SYNJ2BP-COX16A0A087WUM0 186 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ATP6V1G1O75348 118 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 GAS8O95995 478 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ZNF23P17027 643 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ITGA2P17301 1181 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 SCP2P22307 547 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ADSSP30520 456 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 AHRP35869 848 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 USP8P40818 1118 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 MDH1P40925 334 aaKnown RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 THOP1P52888 689 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ARFIP1P53367 373 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 SEC61A1P61619 476 aaKnown RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 MFAP5Q13361 173 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 FHL2Q14192 279 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 GK2Q14410 553 aaPredicted RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 ITPRIPL2Q3MIP1 535 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 PRAMEF7Q5VXH5 474 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 IRGCQ6NXR0 463 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 IL17RELQ6ZVW7 336 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 FJX1Q86VR8 437 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 TMEM219Q86XT9 240 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ADHFE1Q8IWW8 467 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.35□□□□□ -1.55
COPS3-205ENST00000463097 DCP1BQ8IZD4 617 aaKnown RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 THEM5Q8N1Q8 247 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 RBMXL3Q8N7X1 1067 aaKnown RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 OR10Q1Q8NGQ4 319 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 SAP25Q8TEE9 199 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 WBP2Q969T9 261 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ESAMQ96AP7 390 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ABHD8Q96I13 439 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 IWS1Q96ST2 819 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 NDNQ99608 321 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 TRMT61BQ9BVS5 477 aaKnown RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 PANK2Q9BZ23 570 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 CCSER1Q9C0I3 900 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 WWTR1Q9GZV5 400 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 RBM38Q9H0Z9 239 aaKnown RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 TLE6Q9H808 572 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 COQ10BQ9H8M1 238 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 OLFML3Q9NRN5 406 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 FAM212BQ9NTI7 297 aaPredicted RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 PIGVQ9NUD9 493 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 HIF1ANQ9NWT6 349 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 ANKMY1Q9P2S6 941 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 MYRFQ9Y2G1 1151 aa5.35□□□□□ -1.55
COPS3-205ENST00000463097 RRP15Q9Y3B9 282 aaKnown RBP5.35□□□□□ -1.55
COPS3-205ENST00000463097 TRAV18A0A075B6X5 111 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 C17orf105B2RV13 164 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 SLC28A1O00337 649 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 PSMD3O43242 534 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 SCO2O43819 266 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 ACSL4O60488 711 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 PAPSS2O95340 614 aaPredicted RBP5.34□□□□□ -1.55
COPS3-205ENST00000463097 NUDT3O95989 172 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 HSPA5P11021 654 aaKnown RBP5.34□□□□□ -1.55
COPS3-205ENST00000463097 MMP13P45452 471 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 TRA2BP62995 288 aaKnown RBP5.34□□□□□ -1.55
COPS3-205ENST00000463097 IRX4P78413 519 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 MBTD1Q05BQ5 628 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 SPP2Q13103 211 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 TRAF3Q13114 568 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 SCGB2A2Q13296 93 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 ASPRV1Q53RT3 343 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 KLHL10Q6JEL2 608 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 SLC25A24Q6NUK1 477 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 RHBDF2Q6PJF5 856 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 AFTPHQ6ULP2 937 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 COLCA1Q6ZS62 124 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 TECPR1Q7Z6L1 1165 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 LONP2Q86WA8 852 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 SMRP1Q8NCR6 262 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 FAM216AQ8WUB2 273 aa5.34□□□□□ -1.55
COPS3-205ENST00000463097 TSACCQ96A04 125 aaPredicted RBP5.34□□□□□ -1.55
COPS3-205ENST00000463097 PRMT1Q99873 361 aaKnown RBP5.34□□□□□ -1.55
COPS3-205ENST00000463097 ASCL2Q99929 193 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms