RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SLC26A3P40879 764 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 MPP1Q00013 466 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 OCA2Q04671 838 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 KLC1Q07866 573 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 CBLBQ13191 982 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 RAPSNQ13702 412 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 FAM53BQ14153 422 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 CRYMQ14894 314 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 PPP1R7Q15435 360 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 TUBB8Q3ZCM7 444 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 SPANXN3Q5MJ09 141 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 UGT3A1Q6NUS8 523 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 KCNMB4Q86W47 210 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 CNTN4Q8IWV2 1026 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 IQCKQ8N0W5 287 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 ZADH2Q8N4Q0 377 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 DTWD1Q8N5C7 304 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 CSNK1A1LQ8N752 337 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 GABPB2Q8TAK5 448 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 COL26A1Q96A83 441 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 MIEF2Q96C03 454 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 SNRNP40Q96DI7 357 aaKnown RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 CCDC138Q96M89 665 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 TGIF2Q9GZN2 237 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 PCBD2Q9H0N5 130 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 SOX17Q9H6I2 414 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 GRPEL1Q9HAV7 217 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 ZBTB20Q9HC78 741 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 IARS2Q9NSE4 1012 aaKnown RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 TMEM184CQ9NVA4 438 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF282Q9UDV7 671 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 TAC3Q9UHF0 121 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 RUVBL1Q9Y265 456 aaKnown RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 MAU2Q9Y6X3 613 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 NAV2Q8IVL1 2488 aa8.71□□□□□ -1.01
BRCA1-207ENST00000461798 RELNP78509 3460 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 TCP11X1B4DZS4 312 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 FOXS1O43638 330 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 CBX6O95503 412 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 HPP00738 406 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 AHSGP02765 367 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 C8GP07360 202 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 F7P08709 466 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 ERVK-10P10266 1014 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 FBLP22087 321 aaKnown RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 ITGA3P26006 1051 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 IMPA1P29218 277 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 UQCRFS1P47985 274 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 RGS4P49798 205 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 DHX9Q08211 1270 aaKnown RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 Q0VFX4 171 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 CUL1Q13616 776 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 FRG1Q14331 258 aaKnown RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 RBBP7Q16576 425 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 HKDC1Q2TB90 917 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 MSS51Q4VC12 460 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 PRR30Q53SZ7 412 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 VWA2Q5GFL6 755 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 FHL5Q5TD97 284 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 AGAP7PQ5VUJ5 663 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 SHISA6Q6ZSJ9 500 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 SYDE1Q6ZW31 735 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 UBE2R2Q712K3 238 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 NDUFAF7Q7L592 441 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 PIWIL4Q7Z3Z4 852 aaKnown RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 IGDCC3Q8IVU1 814 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 CPNE9Q8IYJ1 553 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 METTL27Q8N6F8 245 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 PPFIBP2Q8ND30 876 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 MCOLN3Q8TDD5 553 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 PPP4R1Q8TF05 950 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 EEF1AKMT1Q8WVE0 214 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 THAP11Q96EK4 314 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 C19orf60Q96EN9 201 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 CABS1Q96KC9 395 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 AGAP4Q96P64 663 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 LMF1Q96S06 567 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 CRB3Q9BUF7 120 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 SLC29A3Q9BZD2 475 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 LHPPQ9H008 270 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 DDX47Q9H0S4 455 aaKnown RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 KCNF1Q9H3M0 494 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 PARVBQ9HBI1 364 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 PLAC1Q9HBJ0 212 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 MKKSQ9NPJ1 570 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 CUEDC1Q9NWM3 386 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 TAS2R13Q9NYV9 303 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 STOX2Q9P2F5 926 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 TRMT6Q9UJA5 497 aaKnown RBP8.71□□□□□ -1.02
BRCA1-207ENST00000461798 C3orf18Q9UK00 162 aa8.71□□□□□ -1.02
BRCA1-207ENST00000461798 LOC102723996A0A087X1L8 192 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 IDSB3KWA1 339 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 H0YIG0 161 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 H7BY64 318 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 SYF2O95926 243 aaKnown RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CYC1P08574 325 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 ACPPP15309 386 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 FDXRP22570 491 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CCND1P24385 295 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms