RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	IMPA1	P29218	277 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	GCGR	P47871	477 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	TBPL1	P62380	186 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	ARHGAP19	Q14CB8	494 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	IGFBP7	Q16270	282 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	CYP2A13	Q16696	494 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	PHKG1	Q16816	387 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	COLEC12	Q5KU26	742 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	UBAP2	Q5T6F2	1119 aa	Known RBP	12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	PRAMEF13	Q5VWM6	474 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	RHBDD2	Q6NTF9	364 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	FIGLA	Q6QHK4	219 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	TAOK1	Q7L7X3	1001 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	CMC1	Q7Z7K0	106 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	ZNF655	Q8N720	491 aa	Predicted RBP	12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	OR2L3	Q8NG85	312 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	GPR22	Q99680	433 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	ENAM	Q9NRM1	1142 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	TXLNG	Q9NUQ3	528 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	STOX2	Q9P2F5	926 aa	Predicted RBP	12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	NDOR1	Q9UHB4	597 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	PLCL2	Q9UPR0	1127 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	AP1M2	Q9Y6Q5	423 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	CCDC88C	Q9P219	2028 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	SPTBN1	Q01082	2364 aa	Known RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507		A0A087WUV0	522 aa	Predicted RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507		A0A0J9YVX5	310 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	ARGFX	A6NJG6	315 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	CYSRT1	A8MQ03	144 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	ZNF749	O43361	778 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	HCRTR1	O43613	425 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	SORBS2	O94875	1100 aa	Known RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	S100B	P04271	92 aa	Predicted RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	CCDC166	P0CW27	439 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	ECHS1	P30084	290 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	PGD	P52209	483 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	RAB10	P61026	200 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	CBLB	Q13191	982 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	NAE1	Q13564	534 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	CSHL1	Q14406	222 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	NAA25	Q14CX7	972 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	TSN	Q15631	228 aa	Known RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	PTCHD3	Q3KNS1	767 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	ZC3H12B	Q5HYM0	836 aa	Known RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	MROH9	Q5TGP6	573 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	C1orf189	Q5VU69	101 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	ICE2	Q659A1	982 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	AGTRAP	Q6RW13	159 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	TMEM207	Q6UWW9	146 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	HPS6	Q86YV9	775 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	TEX19	Q8NA77	164 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	FBXO15	Q8NCQ5	510 aa	Predicted RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	HMGCLL1	Q8TB92	370 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	PROKR1	Q8TCW9	393 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	ANKRD49	Q8WVL7	239 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	DLG3	Q92796	817 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	GBP5	Q96PP8	586 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	C17orf62	Q9BQA9	187 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	SELENOS	Q9BQE4	189 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	DPH7	Q9BTV6	452 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	SLC25A23	Q9BV35	468 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	SPRTN	Q9H040	489 aa	Predicted RBP	12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	ING2	Q9H160	280 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	L2HGDH	Q9H9P8	463 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	POPDC3	Q9HBV1	291 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	ACSS2	Q9NR19	701 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	PLAA	Q9Y263	795 aa		12.17	□□□□□ -0.46
FDPS-204	ENST00000461507	EXOC1L	A0A1B0GW35	172 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507		A0A1W2PPV9	198 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507		C9J4A7	227 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507		E7ENX8	843 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	ZSCAN9	O15535	394 aa	Predicted RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	ZNF500	O60304	480 aa	Predicted RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	NRP2	O60462	931 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	KLF7	O75840	302 aa	Predicted RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	FKBP9	O95302	570 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	TSPAN12	O95859	305 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	ENO2	P09104	434 aa	Predicted RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	MSH2	P43246	934 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	VSX2	P58304	361 aa	Predicted RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	YBX1	P67809	324 aa	Known RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	TAP2	Q03519	686 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.16	□□□□□ -0.46	3e-10	■■■■□ 22.2
FDPS-204	ENST00000461507	CHAF1B	Q13112	559 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	UBAP2L	Q14157	1087 aa	Known RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	FCRL6	Q6DN72	434 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	CYS1	Q717R9	158 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	MED25	Q71SY5	747 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	ADAMTSL2	Q86TH1	951 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	C17orf64	Q86WR6	236 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	RAB43	Q86YS6	212 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	MCAT	Q8IVS2	390 aa	Known RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	DNAJC22	Q8N4W6	341 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	TTC29	Q8NA56	475 aa	Predicted RBP	12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	OR2A1	Q8NGT9	310 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	ATL1	Q8WXF7	558 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	PYCR2	Q96C36	320 aa		12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms