RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PDGFRLQ15198 375 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 TAF11Q15544 211 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 FUT11Q495W5 492 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CD300EQ496F6 205 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ACCSLQ4AC99 568 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 GLE1Q53GS7 698 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 PPP6R3Q5H9R7 873 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKRD20A2Q5SQ80 823 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 RBM20Q5T481 1227 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CERCAMQ5T4B2 595 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKRD20A1Q5TYW2 823 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 GKAP1Q5VSY0 366 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKRD20A3Q5VUR7 823 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 RWDD4Q6NW29 188 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CFAP161Q6P656 301 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC2A7Q6PXP3 512 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CTAGE6Q86UF2 777 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CACUL1Q86Y37 369 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ZDHHC17Q8IUH5 632 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CTAGE4Q8IX94 777 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CCDC105Q8IYK2 499 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ABCA7Q8IZY2 2146 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 DCLK2Q8N568 766 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 LINC00469Q8N7U9 141 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM98AQ8NCA5 519 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 TOR1AIP2Q8NFQ8 470 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 SUN3Q8TAQ9 357 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 DEPDC1BQ8WUY9 529 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKRD49Q8WVL7 239 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ASB10Q8WXI3 467 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM3CQ92520 227 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CPT1BQ92523 772 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 RAPGEF5Q92565 580 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 KRT35Q92764 455 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 NELL1Q92832 810 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 FUBP1Q96AE4 644 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 HAUS1Q96CS2 278 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 TMA16Q96EY4 203 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 STAMBPL1Q96FJ0 436 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 MED30Q96HR3 178 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CELF6Q96J87 481 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 VCPIP1Q96JH7 1222 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 LMLNQ96KR4 655 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 RPRD1AQ96P16 312 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM118BQ9BPY3 351 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 NSRP1Q9H0G5 558 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 DHX35Q9H5Z1 703 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 LMAN1LQ9HAT1 526 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CD93Q9NPY3 652 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 LZTFL1Q9NQ48 299 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 G6PC2Q9NQR9 355 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ABCB8Q9NUT2 735 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ATAD3AQ9NVI7 634 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 NDUFAF4Q9P032 175 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CRNNQ9UBG3 495 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ATPIF1Q9UII2 106 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 SERTAD3Q9UJW9 196 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 FZD10Q9ULW2 581 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 STAP1Q9ULZ2 295 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 MYO18BQ8IUG5 2567 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 NYNRINQ9P2P1 1898 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 OTOGLQ3ZCN5 2332 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 DOCK9Q9BZ29 2069 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 A0A1W2PS29 197 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 TBC1D3BA6NDS4 549 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 UNC119BA6NIH7 251 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 E9PAM4 449 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 F5H5T6 163 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 K7ERQ8 282 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SGK1O00141 431 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 GJB3O75712 270 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 PALMO75781 387 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 KAT7O95251 611 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CER1O95813 267 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 KRT14P02533 472 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ELANEP08246 267 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 MYBL1P10243 752 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CHRNB1P11230 501 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 UBL4AP11441 157 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 KRT10P13645 584 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF37AP17032 561 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 M6PRP20645 277 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 EPHA3P29320 983 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SERPINA4P29622 427 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CYLC1P35663 651 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 HSPA9P38646 679 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 VAV2P52735 878 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 BLVRAP53004 296 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SNX16P57768 344 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 B2MP61769 119 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 RPS7P62081 194 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 HPCAP84074 193 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 TIAL1Q01085 375 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CKAP4Q07065 602 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SEMA3BQ13214 749 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 TUBB3Q13509 450 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CYLC2Q14093 348 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ITIH4Q14624 930 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 PPP1R7Q15435 360 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SPA17Q15506 151 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms