RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 LRIF1Q5T3J3 769 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 TMCO2Q7Z6W1 182 aaPredicted RBP18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 ZZZ3Q8IYH5 903 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 FAM83FQ8NEG4 500 aaPredicted RBP18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 TMEM121BQ9BXQ6 578 aaPredicted RBP18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 DSN1Q9H410 356 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 SNX6Q9UNH7 406 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 OR2AG2A6NM03 316 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 ITGAMP11215 1152 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 GJA1P17302 382 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 TGM1P22735 817 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 GADD45AP24522 165 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 RCVRNP35243 200 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 CAMK2GQ13555 558 aaPredicted RBP18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 POM121L1PQ3SYA9 428 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 CCSAPQ6IQ19 270 aaPredicted RBP18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 PLEKHG7Q6ZR37 379 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 CHST9Q7L1S5 443 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 PLPP6Q8IY26 295 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 BTBD2Q9BX70 525 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 RAD18Q9NS91 495 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 RLIMQ9NVW2 624 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 TMEM45AQ9NWC5 275 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 MANSC4A6NHS7 340 aaPredicted RBP18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 INPPL1O15357 1258 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 PSMA3P25788 255 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 NPRL3Q12980 569 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 ACOX1Q15067 660 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 HKDC1Q2TB90 917 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 DGKKQ5KSL6 1271 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 KIAA1614Q5VZ46 1190 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 PTOV1Q86YD1 416 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 ENTHD1Q8IYW4 607 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 CLIP4Q8N3C7 705 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 POC5Q8NA72 575 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 PLD4Q96BZ4 506 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 COPS8Q99627 209 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 COPS4Q9BT78 406 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 SLIRPQ9GZT3 109 aaKnown RBP18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 SMG9Q9H0W8 520 aaKnown RBP18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 TM9SF3Q9HD45 589 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 SH3BP4Q9P0V3 963 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 SLC6A14Q9UN76 642 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 FPR1P21462 350 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 ABRQ12979 859 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 CAPN13Q6MZZ7 669 aaPredicted RBP18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 NLGN4XQ8N0W4 816 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 APH1BQ8WW43 257 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 SCAMP4Q969E2 229 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 MARCH7Q9H992 704 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 GPR83Q9NYM4 423 aa18.96■□□□□ 0.63
CNEP1R1-203ENST00000458059 AIREO43918 545 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 CD40LGP29965 261 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 CD70P32970 193 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 GRK5P34947 590 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 RAB15P59190 212 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 IRF8Q02556 426 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 FRG2Q64ET8 278 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 TMEM53Q6P2H8 277 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 CRTC1Q6UUV9 634 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 FRG2BQ96QU4 278 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 KLF16Q9BXK1 252 aaPredicted RBP18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 SCHIP1Q9P0W5 487 aaPredicted RBP18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 MICAL3Q7RTP6 2002 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 GSTT2P0CG29 244 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 GSTT2BP0CG30 244 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 AMD1P17707 334 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 XKR6Q5GH73 641 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 SYT6Q5T7P8 510 aaPredicted RBP18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 S100ZQ8WXG8 99 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 SCLYQ96I15 445 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 HTATIP2Q9BUP3 242 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 TTLL2Q9BWV7 592 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 TPT1P8Q9HAU6 139 aa18.95■□□□□ 0.62
CNEP1R1-203ENST00000458059 SAP18O00422 153 aaKnown RBP18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 PRRG1O14668 218 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 RPS3P23396 243 aaKnown RBP eCLIP18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 AOAHP28039 575 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 DUOXA1Q1HG43 343 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 FAM26DQ5JW98 314 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 CACTIN-AS1Q8N1I8 211 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 LILRA3Q8N6C8 439 aaPredicted RBP18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 OR4K1Q8NGD4 311 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 ZDHHC6Q9H6R6 413 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 NECTIN3Q9NQS3 549 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 KCTD5Q9NXV2 234 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 FZD4Q9ULV1 537 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 RNF6Q9Y252 685 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 UNC80Q8N2C7 3258 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 TMEM88BA6NKF7 163 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 H7C4K7 107 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 LHCGRP22888 699 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 HOXD12P35452 270 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 TGFBR2P37173 567 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 SLC19A1P41440 591 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 MAGEA2P43356 314 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 CCSMST1Q4G0I0 132 aa18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 PCSK9Q8NBP7 692 aaKnown RBP18.94■□□□□ 0.62
CNEP1R1-203ENST00000458059 FEVQ99581 238 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms