RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ADGRD2Q7Z7M1 963 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 ADHFE1Q8IWW8 467 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 ZCCHC7Q8N3Z6 543 aaKnown RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 ST13P5Q8NFI4 369 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 PJA1Q8NG27 643 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 OR7G3Q8NG95 312 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 OR7A2PQ8NGA2 310 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 TMIGD2Q96BF3 282 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 NUS1Q96E22 293 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 PYURFQ96I23 114 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 MPP4Q96JB8 637 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 LINC00615Q96LM1 132 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 OSBPL10Q9BXB5 764 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 RSL24D1Q9UHA3 163 aaKnown RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 MAGED1Q9Y5V3 778 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 KCNE2Q9Y6J6 123 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 PCM1Q15154 2024 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 CHD9Q3L8U1 2897 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 OTOL1A6NHN0 477 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 FPGTO14772 594 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 PAPLNO95428 1278 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 COX7A2P14406 83 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 GPX2P18283 190 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 ASMTP46597 345 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 CDK9P50750 372 aaKnown RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 ELAVL3Q14576 367 aaKnown RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 SF1Q15637 639 aaKnown RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 CCNYL2Q5T2Q4 361 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 ADNP2Q6IQ32 1131 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 TMC5Q6UXY8 1006 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 CAMKMTQ7Z624 323 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 SFTPA1Q8IWL2 248 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 CDC26Q8NHZ8 85 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 ZNF480Q8WV37 535 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 WDR34Q96EX3 536 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 PANX1Q96RD7 426 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 MAGEB17A8MXT2 336 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 CLIC1O00299 241 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 ETHE1O95571 254 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 IST1P53990 364 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 RAE1P78406 368 aaKnown RBP16.11■□□□□ 0.17
CCDC43-202ENST00000457422 SPIN4Q56A73 249 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 FAM78AQ5JUQ0 283 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 C10orf62Q5T681 223 aaPredicted RBP16.11■□□□□ 0.17
CCDC43-202ENST00000457422 XKR5Q6UX68 686 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 SLCO4C1Q6ZQN7 724 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 TRAPPC5Q8IUR0 188 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 PNPT1Q8TCS8 783 aaKnown RBP16.11■□□□□ 0.17
CCDC43-202ENST00000457422 CHTF18Q8WVB6 975 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 TBC1D20Q96BZ9 403 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 PPP1R16AQ96I34 528 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 ZNF514Q96K75 400 aaPredicted RBP16.11■□□□□ 0.17
CCDC43-202ENST00000457422 RBM4BQ9BQ04 359 aaKnown RBP16.11■□□□□ 0.17
CCDC43-202ENST00000457422 TMEM106CQ9BVX2 250 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 RBM4Q9BWF3 364 aaKnown RBP16.11■□□□□ 0.17
CCDC43-202ENST00000457422 OR2AG1Q9H205 316 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 DEC1Q9P2X7 70 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 SAMD4AQ9UPU9 718 aaKnown RBP16.11■□□□□ 0.17
CCDC43-202ENST00000457422 GMEB1Q9Y692 573 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 KIF26AQ9ULI4 1882 aaPredicted RBP16.11■□□□□ 0.17
CCDC43-202ENST00000457422 C2orf16Q68DN1 1984 aa16.11■□□□□ 0.17
CCDC43-202ENST00000457422 C17orf113A0A1B0GUU1 675 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 SCAMP2O15127 329 aaKnown RBP16.1■□□□□ 0.17
CCDC43-202ENST00000457422 EPN2O95208 641 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 C1QCP02747 245 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 C6P13671 934 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 ADRB3P13945 408 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 SLC5A2P31639 672 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 TBPL1P62380 186 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 LAPTM5Q13571 262 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 ZIK1Q3SY52 487 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-202ENST00000457422 TMEM52BQ4KMG9 183 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 TTC23Q5W5X9 447 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 CPZQ66K79 652 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 RAET1GQ6H3X3 334 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 CAPN13Q6MZZ7 669 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-202ENST00000457422 CES5AQ6NT32 575 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 ERICH5Q6P6B1 374 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 CFAP206Q8IYR0 622 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 OR5K1Q8NHB7 308 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 HUS1BQ8NHY5 278 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 NEIL2Q969S2 332 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 REPS1Q96D71 796 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 PHF12Q96QT6 1004 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 FAM129BQ96TA1 746 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 SH3GL3Q99963 347 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 AASDHPPTQ9NRN7 309 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 SIRT5Q9NXA8 310 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 GNGT2O14610 69 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 MMP20O60882 483 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 SH3BGRLO75368 114 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 GPR1P46091 355 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 HLCSP50747 726 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 ESRRGP62508 458 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 ZBED5Q49AG3 693 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 MED27Q6P2C8 311 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 GALNT18Q6P9A2 607 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 LPCAT2Q7L5N7 544 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 GPR141Q7Z602 305 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 NPAS3Q8IXF0 933 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms