RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CRHBPP24387 322 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 PIGAP37287 484 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 MAGEA8P43361 318 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 CD97P48960 835 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 CBX3Q13185 183 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 KCNAB2Q13303 367 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 CCSMST1Q4G0I0 132 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 FGD3Q5JSP0 725 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 GRHL2Q6ISB3 625 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 GPR155Q7Z3F1 870 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 ZBTB8BQ8NAP8 495 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 ZNF555Q8NEP9 628 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 HCAR2Q8TDS4 363 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 FOXJ1Q92949 421 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 GLYATL1Q969I3 302 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 COX4I2Q96KJ9 171 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 OR4K3Q96R72 315 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 LTB4R2Q9NPC1 389 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 FBXO10Q9UK96 956 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 PCDHGA8Q9Y5G5 932 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 EVPLLA8MZ36 301 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 FPGTO14772 594 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 NPC1O15118 1278 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 GPX2P18283 190 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 NNMTP40261 264 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 HNF4AP41235 474 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 PREPP48147 710 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 PRLHRP49683 370 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 VASPP50552 380 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 GRSF1Q12849 480 aaKnown RBP eCLIP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 PPP1R8Q12972 351 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 NAE1Q13564 534 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 ZNF284Q2VY69 593 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 PLPP4Q5VZY2 271 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 XKR5Q6UX68 686 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 LILRA3Q8N6C8 439 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 OR8J2Q8NGG1 315 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 TBC1D20Q96BZ9 403 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 METTL2AQ96IZ6 378 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 LRIG1Q96JA1 1093 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 ZSWIM3Q96MP5 696 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 CCM2Q9BSQ5 444 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 NAA50Q9GZZ1 169 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 AASDHPPTQ9NRN7 309 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 FAM8A1Q9UBU6 413 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 RUVBL1Q9Y265 456 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 CLIC1O00299 241 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 NOL3O60936 208 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 KCNK5O95279 499 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 PRKACGP22612 351 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 MMP12P39900 470 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 C21orf59P57076 290 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 NEDD8Q15843 81 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 SYTL3Q4VX76 610 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 LIPIQ6XZB0 460 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 HIPK1Q86Z02 1210 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 ZZZ3Q8IYH5 903 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 CHDHQ8NE62 594 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 OR10Q1Q8NGQ4 319 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 OR13F1Q8NGS4 319 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 OR56A3Q8NH54 315 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 TMEM159Q96B96 161 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 OTUB2Q96DC9 234 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 MTERF1Q99551 399 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 FAM120CQ9NX05 1096 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 VNN3Q9NY84 501 aa17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 TMEFF2Q9UIK5 374 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 SAMD4AQ9UPU9 718 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-209ENST00000456560 RANBP2P49792 3224 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 YY2O15391 372 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 ATG13O75143 517 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 CISD3P0C7P0 127 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 HSD3B1P14060 373 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 ENGP17813 658 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 CD247P20963 164 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 HSD3B2P26439 372 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 NTHL1P78549 312 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 SPIDRQ14159 915 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 ZC3H12BQ5HYM0 836 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 PRSS36Q5K4E3 855 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 C6orf141Q5SZD1 244 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 BROXQ5VW32 411 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 DCP2Q8IU60 420 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 ZDHHC21Q8IVQ6 265 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 C7orf61Q8IZ16 206 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 PLEKHA8Q96JA3 519 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 PANX1Q96RD7 426 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 PKP4Q99569 1192 aa17.77■□□□□ 0.44
SEMA3B-209ENST00000456560 CATP04040 527 aaKnown RBP17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 COX7A2P14406 83 aa17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 IL7RP16871 459 aa17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 XPAP23025 273 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 BDKRB1P46663 353 aa17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 PSMD7P51665 324 aa17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 RAE1P78406 368 aaKnown RBP17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 TMEM115Q12893 351 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 BNIP3Q12983 259 aa17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 VMACQ2NL98 169 aa17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 CTU2Q2VPK5 515 aaKnown RBP17.76■□□□□ 0.43
SEMA3B-209ENST00000456560 ZNF658BQ4V348 819 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms