RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 VN1R1Q9GZP7 353 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ETNK1Q9HBU6 452 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RAB6BQ9NRW1 208 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 INTS7Q9NVH2 962 aaKnown RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RIC8BQ9NVN3 520 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FEZ2Q9UHY8 353 aaPredicted RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NPIPA1Q9UND3 350 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NEU2Q9Y3R4 380 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KLF2Q9Y5W3 355 aaPredicted RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CAPN6Q9Y6Q1 641 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GTF3C1Q12789 2109 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 VPS13CQ709C8 3753 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 IGLV3-12A0A075B6K2 115 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 HEATR9A2RTY3 570 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FAM90A27PA6NNH2 459 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 E7EVH7 732 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SGK494L7N484 410 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 QSOX1O00391 747 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PRMT5O14744 637 aaPredicted RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KDM1AO60341 852 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KLHL41O60662 606 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RDH16O75452 317 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 WFS1O76024 890 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SLCO2B1O94956 709 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TJP3O95049 919 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 BMP10O95393 424 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SYF2O95926 243 aaKnown RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ONECUT2O95948 504 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 B3GALT4O96024 378 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ANXA5P08758 320 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CD63P08962 238 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GSTM1P09488 218 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 C8orf89P0DMQ9 161 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PIM1P11309 404 aaPredicted RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CXCR2P25025 360 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PSMA3P25788 255 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FMO4P31512 558 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PTGER1P34995 402 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RPA3P35244 121 aaPredicted RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PTGER4P35408 488 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 COILP38432 576 aaPredicted RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 COPS2P61201 443 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OLR1P78380 273 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GSTM4Q03013 218 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ACVR1Q04771 509 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CDH17Q12864 832 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OR1C1Q15619 314 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 INAQ16352 499 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ACSBG2Q5FVE4 666 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RNFT1Q5M7Z0 435 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZNF468Q5VIY5 522 aaPredicted RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SPINK14Q6IE38 97 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 LRRC8BQ6P9F7 803 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OTOAQ7RTW8 1153 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FGD2Q7Z6J4 655 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PAQR7Q86WK9 346 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CRLF3Q8IUI8 442 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CEP97Q8IW35 865 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CHERPQ8IWX8 916 aaKnown RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RPRMLQ8N4K4 120 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PPHLN1Q8NEY8 458 aaKnown RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GSDMBQ8TAX9 411 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 AGAP11Q8TF27 550 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SLC22A18Q96BI1 424 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 LRRC45Q96CN5 670 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FRMD6Q96NE9 622 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PLCD4Q9BRC7 762 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 DRC3Q9H069 523 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZNF700Q9H0M5 742 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 P2RY12Q9H244 342 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MRPS30Q9NP92 439 aaKnown RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 LUC7LQ9NQ29 371 aaKnown RBP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CHRAC1Q9NRG0 131 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SYBUQ9NX95 663 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ABI3Q9P2A4 366 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GNPTGQ9UJJ9 305 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CRYL1Q9Y2S2 319 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NIPBLQ6KC79 2804 aaeCLIP5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TLN2Q9Y4G6 2542 aa5.67□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ABCA2Q9BZC7 2435 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 JMJD1CQ15652 2540 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NKX2-6A6NCS4 301 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SMAPO00193 183 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CD3EAPO15446 510 aaKnown RBP5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 LIASO43766 372 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NDUFS3O75489 264 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SLC16A8O95907 504 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ESRRAP11474 423 aaPredicted RBP5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ABOP16442 354 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MGAT1P26572 445 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CMPK1P30085 196 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SLC26A3P40879 764 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 XCR1P46094 333 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 VPS41P49754 854 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TBPL1P62380 186 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 BASP1P80723 227 aaKnown RBP5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OC90Q02509 493 aaPredicted RBP5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TLE4Q04727 773 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TUBA3CQ13748 450 aa5.66□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ABRAXAS2Q15018 415 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms