RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 NRG3P56975 720 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 YWHAZP63104 245 aaKnown RBP4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 VLDLRP98155 873 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 GUCY1B3Q02153 619 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 TUBA3CQ13748 450 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 SQLEQ14534 574 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 CYTH1Q15438 398 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 INO80DQ53TQ3 878 aaPredicted RBP4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 ZMAT1Q5H9K5 638 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 FAM120AOSQ5T036 256 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 FKBP15Q5T1M5 1219 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 TXNRD3NBQ6F5E7 133 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 SPINK14Q6IE38 97 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 TUBA3EQ6PEY2 450 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 WASH2PQ6VEQ5 465 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 TRIM72Q6ZMU5 477 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 NDUFAF7Q7L592 441 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 WDR53Q7Z5U6 358 aaPredicted RBP4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 C12orf56Q8IXR9 622 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 CDYL2Q8N8U2 506 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 CCDC110Q8TBZ0 833 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 TAS1R2Q8TE23 839 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 FAXDC2Q96IV6 333 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 MSL2Q9HCI7 577 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 KLHL1Q9NR64 748 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 PNPLA3Q9NST1 481 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 C14orf119Q9NWQ9 140 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 KCTD5Q9NXV2 234 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 VPS18Q9P253 973 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 ALG6Q9Y672 507 aa4.93□□□□□ -1.62
SBDSP1-204ENST00000453858 BUB1O43683 1085 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 KDELR3O43731 214 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 VEGFDO43915 354 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 LMX1BO60663 402 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 NEURL1O76050 574 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 HEXIM1O94992 359 aaKnown RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 IGSF6O95976 241 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 ATP1A1P05023 1023 aaKnown RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 ITGAMP11215 1152 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 ZNF24P17028 368 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 LHCGRP22888 699 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 PSMA5P28066 241 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 LOXP28300 417 aaPredicted RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 EEF1DP29692 281 aaKnown RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 UBA7P41226 1012 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 ASCL1P50553 236 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 GEMIN4P57678 1058 aaKnown RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 SORDQ00796 357 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 MTA1Q13330 715 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 VEZF1Q14119 521 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 USP10Q14694 798 aaKnown RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 MESDQ14696 234 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 PDCD1Q15116 288 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 TDRD12Q587J7 1177 aaKnown RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 AWAT1Q58HT5 328 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 RAET1GQ6H3X3 334 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 H3F3CQ6NXT2 135 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 B3GNT6Q6ZMB0 384 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 SHISA6Q6ZSJ9 500 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 SEM1Q6ZVN7 128 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 COX15Q7KZN9 410 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 GALNTL5Q7Z4T8 443 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 C1QL4Q86Z23 238 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 TTC39CQ8N584 583 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 NUDT10Q8NFP7 164 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 OR5AN1Q8NGI8 311 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 OR5M3Q8NGP4 307 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 TMEM174Q8WUU8 243 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 GCDHQ92947 438 aaPredicted RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 FKBP10Q96AY3 582 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 C8orf44Q96CB5 159 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 NUDT11Q96G61 164 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 ZNF396Q96N95 335 aaPredicted RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 SPATA25Q9BR10 227 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 KLC2Q9H0B6 622 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 C12orf65Q9H3J6 166 aaKnown RBP4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 DMAC2Q9NW81 257 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 HRASLS2Q9NWW9 162 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 DDIT4Q9NX09 232 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 HESX1Q9UBX0 185 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 WDR37Q9Y2I8 494 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 PCDHGB1Q9Y5G3 927 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 MRFAP1Q9Y605 127 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 AP1M2Q9Y6Q5 423 aa4.92□□□□□ -1.62
SBDSP1-204ENST00000453858 CCER2I3L3R5 266 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 OVOL3O00110 214 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 MATN3O15232 486 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 DAPK3O43293 454 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 ZSCAN22P10073 491 aaPredicted RBP4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 GPR1P46091 355 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 CASP9P55211 416 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 SCAND1P57086 179 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 SNRPFP62306 86 aaKnown RBP4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 PTPRRQ15256 657 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 OR1C1Q15619 314 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 ETFDHQ16134 617 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 CNGA2Q16280 664 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 SLC5A12Q1EHB4 618 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms