RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 NADK2Q4G0N4 442 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 ZNF470Q6ECI4 717 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 NEPROQ6NW34 567 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 OR2Y1Q8NGV0 311 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 LPGAT1Q92604 370 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 ZUFSPQ96AP4 578 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 MFRPQ9BY79 579 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 CUTCQ9NTM9 273 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 PCM1Q15154 2024 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 ZCWPW2A0A1B0GU75 182 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 SMIM23A6NLE4 172 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 CATP04040 527 aaKnown RBP20.73■□□□□ 0.91
C9orf3-208ENST00000451893 EIF2S1P05198 315 aaKnown RBP20.73■□□□□ 0.91
C9orf3-208ENST00000451893 PKMP14618 531 aaKnown RBP20.73■□□□□ 0.91
C9orf3-208ENST00000451893 RPA3P35244 121 aaPredicted RBP20.73■□□□□ 0.91
C9orf3-208ENST00000451893 VSX2P58304 361 aaPredicted RBP20.73■□□□□ 0.91
C9orf3-208ENST00000451893 GRB7Q14451 532 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 FAM214AQ32MH5 1076 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 IRAK1BP1Q5VVH5 260 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 YOD1Q5VVQ6 348 aaPredicted RBP20.73■□□□□ 0.91
C9orf3-208ENST00000451893 MIB2Q96AX9 1013 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 MTBPQ96DY7 904 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 CERS2Q96G23 380 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 VPS50Q96JG6 964 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 MENTQ9BUN1 341 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 NUDT9Q9BW91 350 aa20.73■□□□□ 0.91
C9orf3-208ENST00000451893 CNOT10Q9H9A5 744 aaKnown RBP20.73■□□□□ 0.91
C9orf3-208ENST00000451893 INTS10Q9NVR2 710 aaKnown RBP20.73■□□□□ 0.91
C9orf3-208ENST00000451893 ZNF839A8K0R7 811 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 TARM1B6A8C7 271 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 DSCR3O14972 297 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 RRP9O43818 475 aaKnown RBP20.72■□□□□ 0.91
C9orf3-208ENST00000451893 KLF7O75840 302 aaPredicted RBP20.72■□□□□ 0.91
C9orf3-208ENST00000451893 KRT38O76015 456 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 ARNTP27540 789 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 PSMB5P28074 263 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 MAGOHP61326 146 aaKnown RBP20.72■□□□□ 0.91
C9orf3-208ENST00000451893 UBAP2LQ14157 1087 aaKnown RBP20.72■□□□□ 0.91
C9orf3-208ENST00000451893 FCRL6Q6DN72 434 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 CILP2Q8IUL8 1156 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 CTAGE3PQ8IX95 158 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 DCAKDQ8WVC6 231 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 BIRC8Q96P09 236 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 ACAT2Q9BWD1 397 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 ABCF3Q9NUQ8 709 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 UTP6Q9NYH9 597 aaKnown RBP20.72■□□□□ 0.91
C9orf3-208ENST00000451893 IL1RAPL1Q9NZN1 696 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 LUZP4Q9P127 313 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 NBASA2RRP1 2371 aa20.72■□□□□ 0.91
C9orf3-208ENST00000451893 ANKRD12Q6UB98 2062 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 A0A0J9YVX5 310 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 H3BMH7 237 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 VPS26AO75436 327 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 FAM155BO75949 473 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 ITGAXP20702 1163 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 ADARP55265 1226 aaKnown RBP20.71■□□□□ 0.91
C9orf3-208ENST00000451893 CCSMST1Q4G0I0 132 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 DCAF10Q5QP82 559 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 VWA5B1Q5TIE3 1220 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 LMNTD2Q8IXW0 634 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 METTL27Q8N6F8 245 aaPredicted RBP20.71■□□□□ 0.91
C9orf3-208ENST00000451893 PPM1NQ8N819 430 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 OR2L3Q8NG85 312 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 OR9A1PQ8NGU1 263 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 CALML6Q8TD86 181 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 TM9SF4Q92544 642 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 COL26A1Q96A83 441 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 FKBP10Q96AY3 582 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 MRPS30Q9NP92 439 aaKnown RBP20.71■□□□□ 0.91
C9orf3-208ENST00000451893 PPANQ9NQ55 473 aaKnown RBP20.71■□□□□ 0.91
C9orf3-208ENST00000451893 C20orf96Q9NUD7 363 aaPredicted RBP20.71■□□□□ 0.91
C9orf3-208ENST00000451893 P4HTMQ9NXG6 502 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 ZFATQ9P243 1243 aa20.71■□□□□ 0.91
C9orf3-208ENST00000451893 ASH1LQ9NR48 2969 aaKnown RBP20.71■□□□□ 0.91
C9orf3-208ENST00000451893 POLR3GO15318 223 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-208ENST00000451893 SRPX2O60687 465 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-208ENST00000451893 CEACAM4O75871 244 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 IPO13O94829 963 aaKnown RBP20.7■□□□□ 0.9
C9orf3-208ENST00000451893 CCNDBP1O95273 360 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 SNRPAP09012 282 aaKnown RBP20.7■□□□□ 0.9
C9orf3-208ENST00000451893 ITGA3P26006 1051 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 PPP2R2AP63151 447 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 WASHC2DQ5SRD0 308 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 TRMT10BQ6PF06 316 aaKnown RBP20.7■□□□□ 0.9
C9orf3-208ENST00000451893 GALNT16Q8N428 558 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 SMPDL3AQ92484 453 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 CPNE1Q99829 537 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 SLC29A3Q9BZD2 475 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 MLXIPLQ9NP71 852 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 SSU72Q9NP77 194 aaKnown RBP20.7■□□□□ 0.9
C9orf3-208ENST00000451893 ATP13A2Q9NQ11 1180 aa20.7■□□□□ 0.9
C9orf3-208ENST00000451893 FBXO6Q9NRD1 293 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-208ENST00000451893 NXT1Q9UKK6 140 aaKnown RBP20.7■□□□□ 0.9
C9orf3-208ENST00000451893 KRT87PA6NCN2 255 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 KRT15P19012 456 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 VARSP26640 1264 aaKnown RBP20.69■□□□□ 0.9
C9orf3-208ENST00000451893 HSD17B2P37059 387 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 OCA2Q04671 838 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 RBBP7Q16576 425 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 ACSBG2Q5FVE4 666 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms