RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 FAM8A1Q9UBU6 413 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 MTRF1LQ9UGC7 380 aaKnown RBP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 CDC42EP3Q9UKI2 254 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 OR14I1A6ND48 311 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 MBD3L4A6NDZ8 208 aaPredicted RBP7.41□□□□□ -1.22
LINC01961-201ENST00000449954 SERINC4A6NH21 518 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 MBD3L5A6NJ08 208 aaPredicted RBP7.41□□□□□ -1.22
LINC01961-201ENST00000449954 GSC2O15499 205 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 HS6ST1O60243 411 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 FGFR1OPO95684 399 aaKnown RBP7.41□□□□□ -1.22
LINC01961-201ENST00000449954 CYC1P08574 325 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 CHRM5P08912 532 aaPredicted RBP7.41□□□□□ -1.22
LINC01961-201ENST00000449954 MSH3P20585 1137 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 MAGP20916 626 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 FPR1P21462 350 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 SSTR4P31391 388 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 AKT1P31749 480 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 CD151P48509 253 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 CDR2Q01850 454 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 GSTM4Q03013 218 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 ITGA9Q13797 1035 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 KIR2DS3Q14952 304 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 BTBD16Q32M84 506 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 GXYLT1Q4G148 440 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 BCL7AQ4VC05 210 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 RIPPLY2Q5TAB7 128 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 FCRLBQ6BAA4 426 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 TMEM205Q6UW68 189 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 ARHGEF18Q6ZSZ5 1173 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 CRLF3Q8IUI8 442 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 TRIM42Q8IWZ5 723 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 C16orf52Q8NHV5 167 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 SLC30A5Q8TAD4 765 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 FLVCR1-AS1Q8TAF5 88 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 FATE1Q969F0 183 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 CCL19Q99731 98 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 XKR8Q9H6D3 395 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 KCNK13Q9HB14 408 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 LRTM1Q9HBL6 345 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 ICKQ9UPZ9 632 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 KLF13Q9Y2Y9 288 aaPredicted RBP7.41□□□□□ -1.22
LINC01961-201ENST00000449954 FAM215AQ9Y5M1 114 aa7.41□□□□□ -1.22
LINC01961-201ENST00000449954 ABCA1O95477 2261 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 TCRBV5S1A1TA0A578 114 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 HMX2A2RU54 273 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 KLRC4-KLRK1H3BQV0 150 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 DVL2O14641 736 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 MATN3O15232 486 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 CD5LO43866 347 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 KDM1AO60341 852 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 WDR1O75083 606 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 POLBP06746 335 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 PIRTP0C851 137 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 C8orf89P0DMQ9 161 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 ATP1A3P13637 1013 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 MCM3P25205 808 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 RPL7AP62424 266 aaKnown RBP7.4□□□□□ -1.22
LINC01961-201ENST00000449954 NIPAL4Q0D2K0 466 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 BOP1Q14137 746 aaKnown RBP7.4□□□□□ -1.22
LINC01961-201ENST00000449954 EXT1Q16394 746 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 PPP2R5EQ16537 467 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 HYAL4Q2M3T9 481 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 MUM1Q2TAK8 710 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 FIGNQ5HY92 759 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 KLHL10Q6JEL2 608 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 ZNF449Q6P9G9 518 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 DCUN1D2Q6PH85 259 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 UNC5AQ6ZN44 842 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 GALNT12Q8IXK2 581 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 CFAP206Q8IYR0 622 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 NELFBQ8WX92 580 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 METTL21AQ8WXB1 218 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 SMARCE1Q969G3 411 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 MVB12AQ96EY5 273 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 CSPG4P5Q96PW8 444 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 TRIB3Q96RU7 358 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 NRTNQ99748 197 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 SELENOSQ9BQE4 189 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 TGIF2Q9GZN2 237 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 OR52A5Q9H2C5 316 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 C7orf69Q9H7B7 122 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 LIN7BQ9HAP6 207 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 IL26Q9NPH9 171 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 MKKSQ9NPJ1 570 aaPredicted RBP7.4□□□□□ -1.22
LINC01961-201ENST00000449954 PNPLA3Q9NST1 481 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 INTS7Q9NVH2 962 aaKnown RBP7.4□□□□□ -1.22
LINC01961-201ENST00000449954 RBM22Q9NW64 420 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC01961-201ENST00000449954 SPHK1Q9NYA1 384 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 TRPC4Q9UBN4 977 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 C19orf25Q9UFG5 118 aaPredicted RBP7.4□□□□□ -1.22
LINC01961-201ENST00000449954 CDC14AQ9UNH5 594 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 FAM169AQ9Y6X4 670 aa7.4□□□□□ -1.22
LINC01961-201ENST00000449954 MPDZO75970 2070 aa7.4□□□□□ -1.23
LINC01961-201ENST00000449954 SCN2AQ99250 2005 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 A0A096LPE4 126 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 A0A1W2PPR1 153 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 A0A1W2PPZ6 126 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 MEGF11A6BM72 1044 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 HSPB2A8KAH6 182 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 NPIPA2E9PIF3 369 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms