RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 EZRP15311 586 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 ZNF37AP17032 561 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 HRH2P25021 359 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 OR1D4P47884 311 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 CSNK1G2P78368 415 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 CHAF1BQ13112 559 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 TSTA3Q13630 321 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 ATP1A4Q13733 1029 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 VN1R4Q7Z5H5 301 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 PPP1R32Q7Z5V6 425 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 PTRH1Q86Y79 214 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 PLD3Q8IV08 490 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 PALM2Q8IXS6 379 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 TMEM102Q8N9M5 508 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 TTC29Q8NA56 475 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 NACC2Q96BF6 587 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 FBXL8Q96CD0 374 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 TM4SF19Q96DZ7 209 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 C16orf45Q96MC5 204 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 PCBD2Q9H0N5 130 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 ATG10Q9H0Y0 220 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 WDR54Q9H977 334 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 LRRC4CQ9HCJ2 640 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 IRAK4Q9NWZ3 460 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 NSMCE4AQ9NXX6 385 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 NOVA2Q9UNW9 492 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 TP53TG5Q9Y2B4 290 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 PCDHGA9Q9Y5G4 932 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 MDC1Q14676 2089 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 IGLV3-12A0A075B6K2 115 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 CDC7O00311 574 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 FOXS1O43638 330 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 LCMT2O60294 686 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 EIF2S1P05198 315 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 NR1D1P20393 614 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 MAGEA4P43358 317 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 CCL11P51671 97 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 AP1S2P56377 157 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 TBPL1P62380 186 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 ZNF460Q14592 562 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 WHAMMP3Q1A5X7 153 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 HKDC1Q2TB90 917 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 PRMT9Q6P2P2 845 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 LCTLQ6UWM7 567 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 CAPN12Q6ZSI9 719 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 MED25Q71SY5 747 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 MRGPREQ86SM8 312 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 MMGT1Q8N4V1 131 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 NKAPQ8N5F7 415 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 ABHD11Q8NFV4 315 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 OR4K1Q8NGD4 311 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 VPS39Q96JC1 886 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 IP6K3Q96PC2 410 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 OR4K3Q96R72 315 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 SARGQ9BW04 601 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 RAB17Q9H0T7 212 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 CCDC177Q9NQR7 707 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 NDOR1Q9UHB4 597 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 GPN3Q9UHW5 284 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 RUVBL1Q9Y265 456 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 PADI2Q9Y2J8 665 aa13.41□□□□□ -0.26
RTFDC1-204ENST00000449062 ESYT3A0FGR9 886 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 J3QKU1 62 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 P2RX6O15547 441 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 URI1O94763 535 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 ENO2P09104 434 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 PIM1P11309 404 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 MMP11P24347 488 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 FOLR3P41439 243 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 SOX8P57073 446 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 POU4F1Q01851 419 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 ILF2Q12905 390 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 MUM1Q2TAK8 710 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 LACTB2Q53H82 288 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 THEMIS2Q5TEJ8 643 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 GARNL3Q5VVW2 1013 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 PRAMEF13Q5VWM6 474 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 CSNK1A1LQ8N752 337 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 POPDC3Q9HBV1 291 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 ZNF304Q9HCX3 659 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 P4HTMQ9NXG6 502 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 ARL15Q9NXU5 204 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 UTP6Q9NYH9 597 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 CTSFQ9UBX1 484 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 DMGDHQ9UI17 866 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 MRPS2Q9Y399 296 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 MAU2Q9Y6X3 613 aa13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 USP9XQ93008 2570 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-204ENST00000449062 ASH1LQ9NR48 2969 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 SLC28A2O43868 658 aa13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 HIST1H2AGP0C0S8 130 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 HIST1H2ADP20671 130 aa13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 SAT1P21673 171 aa13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 CCND1P24385 295 aa13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 OTX2P32243 289 aa13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 SLC26A3P40879 764 aa13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 CASRP41180 1078 aa13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 CKAP4Q07065 602 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-204ENST00000449062 FAM53BQ14153 422 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms