RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 BCAS4Q8TDM0 211 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 TWIST2Q8WVJ9 160 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 AIF1LQ9BQI0 150 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 DPH7Q9BTV6 452 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 ELOVL6Q9H5J4 265 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 SLC6A20Q9NP91 592 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 PARD6AQ9NPB6 346 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 TMEM184CQ9NVA4 438 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 POMT2Q9UKY4 750 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 SNX6Q9UNH7 406 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 RP1P56715 2156 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 KCNE1BA0A087WTH5 132 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 IGKV1-8A0A0C4DH67 115 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 A0A0G2JND7 137 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 TRPC5OSA6NMA1 111 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 NDUFAB1O14561 156 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 B4GAT1O43505 415 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 DUX1O43812 170 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 ULK1O75385 1050 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 FKBP9O95302 570 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 AQP5P55064 265 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 PPP1CAP62136 330 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 ZRSR2Q15696 482 aaKnown RBP18.78■□□□□ 0.6
SGCE-207ENST00000447873 AMZ1Q400G9 498 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 TCHHL1Q5QJ38 904 aaPredicted RBP18.78■□□□□ 0.6
SGCE-207ENST00000447873 PRR23CQ6ZRP0 262 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 TRIM73Q86UV7 250 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 KRT78Q8N1N4 520 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 OR4K1Q8NGD4 311 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 RHBDD1Q8TEB9 315 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 CCT6BQ92526 530 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 NCSTNQ92542 709 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 PRR11Q96HE9 360 aaPredicted RBP18.78■□□□□ 0.6
SGCE-207ENST00000447873 NUF2Q9BZD4 464 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 ZMYND15Q9H091 742 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 ABCG4Q9H172 646 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 SNX7Q9UNH6 387 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 HCN4Q9Y3Q4 1203 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 PCDHGA11Q9Y5H2 935 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 ASXL3Q9C0F0 2248 aa18.78■□□□□ 0.6
SGCE-207ENST00000447873 H0YIV9 168 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 ZNF195O14628 629 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 SNX3O60493 162 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 LDOC1O95751 146 aaPredicted RBP18.77■□□□□ 0.6
SGCE-207ENST00000447873 ALOX15P16050 662 aaPredicted RBP18.77■□□□□ 0.6
SGCE-207ENST00000447873 GRIA3P42263 894 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 IFT88Q13099 833 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 MED27Q6P2C8 311 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 SPRED1Q7Z699 444 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 FAM129CQ86XR2 697 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 DDIASQ8IXT1 998 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 UBE2E3Q969T4 207 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 REPS1Q96D71 796 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 CNDP2Q96KP4 475 aaKnown RBP18.77■□□□□ 0.6
SGCE-207ENST00000447873 PPP1R36Q96LQ0 422 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 PRM3Q9NNZ6 103 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 PFDN4Q9NQP4 134 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 BTRCQ9Y297 605 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 KLHL20Q9Y2M5 609 aa18.77■□□□□ 0.6
SGCE-207ENST00000447873 ASCC3Q8N3C0 2202 aaKnown RBP18.77■□□□□ 0.6
SGCE-207ENST00000447873 A0A0J9YY10 115 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 MANBAO00462 879 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 CAPN5O15484 640 aaPredicted RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 FOXD2O60548 495 aaPredicted RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 JUNP05412 331 aaKnown RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 MAGP20916 626 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 GRK3P35626 688 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 CSNK1G2P78368 415 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 BTKQ06187 659 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 NAA25Q14CX7 972 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 SGO1Q5FBB7 561 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 PERM1Q5SV97 790 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 VWA5B1Q5TIE3 1220 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 GKAP1Q5VSY0 366 aaPredicted RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 FRG2Q64ET8 278 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 TMIGD1Q6UXZ0 262 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 MAVSQ7Z434 540 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 PIGWQ7Z7B1 504 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 ZNF473Q8WTR7 871 aaKnown RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 C19orf60Q96EN9 201 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 ZDHHC12Q96GR4 267 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 FRG2BQ96QU4 278 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 CCDC3Q9BQI4 270 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 RAB33BQ9H082 229 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 SPNS1Q9H2V7 528 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 ZNF490Q9ULM2 529 aaPredicted RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 UNC13CQ8NB66 2214 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 C4orf47A7E2U8 309 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 PIP5K1BO14986 540 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 DIAPH2O60879 1101 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 PCNAP12004 261 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 CD59P13987 128 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 CDH3P22223 829 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 TGM1P22735 817 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 ARFIP2P53365 341 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 REEP5Q00765 189 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 RBBP5Q15291 538 aaKnown RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 ZNF425Q6IV72 752 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 EPGNQ6UW88 154 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 SCIMPQ6UWF3 145 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms