RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ITM2CQ9NQX7 267 aa9.2□□□□□ -0.94
COL6A4P1-201ENST00000446690 ANAPC2Q9UJX6 822 aa9.2□□□□□ -0.94
COL6A4P1-201ENST00000446690 RUVBL1Q9Y265 456 aaKnown RBP9.2□□□□□ -0.94
COL6A4P1-201ENST00000446690 PCDHB3Q9Y5E6 796 aa9.2□□□□□ -0.94
COL6A4P1-201ENST00000446690 COL4A3Q01955 1670 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 SERTM1A2A2V5 107 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 RFXANKO14593 260 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 KMOO15229 486 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 RNGTTO60942 597 aaKnown RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 LYNP07948 512 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ANXA4P09525 319 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PRPS1L1P21108 318 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 KELP23276 732 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 FASP25445 335 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 CTHP32929 405 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 LTBRP36941 435 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 KIR3DL1P43629 444 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PRKCQQ04759 706 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 TCEA2Q15560 299 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 HKDC1Q2TB90 917 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 RUNDC3AQ59EK9 446 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 METRNLQ641Q3 311 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 DUS1LQ6P1R4 473 aaKnown RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 UNC5DQ6UXZ4 953 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZBTB49Q6ZSB9 765 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ERMP1Q7Z2K6 904 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 TICAM1Q8IUC6 712 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 MSRB3Q8IXL7 192 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 KLHDC8AQ8IYD2 350 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 TMEM132CQ8N3T6 1108 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 IL17RCQ8NAC3 791 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 REPS1Q96D71 796 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 BTBD9Q96Q07 612 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 SLC29A1Q99808 456 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 SH3GL1Q99961 368 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 CENPKQ9BS16 269 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 SGPP1Q9BX95 441 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 TEX101Q9BY14 249 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 SLC17A9Q9BYT1 436 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PAIP1Q9H074 479 aaKnown RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 KCNH6Q9H252 994 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 BRF2Q9HAW0 419 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PHPT1Q9NRX4 125 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 MAGEL2Q9UJ55 1249 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 NEUROG3Q9Y4Z2 214 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 AP4B1Q9Y6B7 739 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 CEP290O15078 2479 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 TCRBV5S2A0A599 114 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PIPSLA2A3N6 862 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PDLIM1O00151 329 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PI15O43692 258 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ADAM23O75077 832 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ERN1O75460 977 aaKnown RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 CPSF4O95639 269 aaKnown RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 FUCA1P04066 466 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 GPIP06744 558 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 SLC35G4P0C7Q5 338 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 CDH1P12830 882 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZNF26P17031 533 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 COL9A1P20849 921 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZNF33BQ06732 778 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 RPA4Q13156 261 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 HTR4Q13639 388 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PAGE2BQ5JRK9 111 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PRAMEF14Q5SWL7 426 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 IER5LQ5T953 404 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PRAMEF13Q5VWM6 474 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ATG9BQ674R7 924 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 NXPE4Q6UWF7 544 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZNF621Q6ZSS3 439 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 DCUN1D3Q8IWE4 304 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 RIMKLAQ8IXN7 391 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 LRRC56Q8IYG6 542 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 TP53I13Q8NBR0 393 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZNF740Q8NDX6 193 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 TRPV3Q8NET8 790 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 TESCQ96BS2 214 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 FAM210AQ96ND0 272 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PANX1Q96RD7 426 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 FERD3LQ96RJ6 166 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 UHRF1Q96T88 793 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 REXO4Q9GZR2 422 aaKnown RBP9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 SPNS1Q9H2V7 528 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 OR51B5Q9H339 312 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 SERHLQ9NQF3 203 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 KCNK6Q9Y257 313 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 PLEKHM1Q9Y4G2 1056 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
COL6A4P1-201ENST00000446690 KIF26AQ9ULI4 1882 aaPredicted RBP9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 A0A096LPI6 279 aa9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 H3BQ06 376 aaPredicted RBP9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 FPGTO14772 594 aa9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 ANXA6P08133 673 aa9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 MYCLP1P12525 358 aaPredicted RBP9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 HSD3B1P14060 373 aa9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 GGT1P19440 569 aa9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 IGFBP4P22692 258 aa9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 HSD3B2P26439 372 aa9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 RAE1P78406 368 aaKnown RBP9.18□□□□□ -0.94
COL6A4P1-201ENST00000446690 KRT33BQ14525 404 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms