RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PON2Q15165 354 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF630Q2M218 657 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 KIAA0319Q5VV43 1072 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 FGD2Q7Z6J4 655 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 ERLEC1Q96DZ1 483 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 MAELQ96JY0 434 aaKnown RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 ACOT8O14734 319 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 INHAP05111 366 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 NCEH1Q6PIU2 408 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 DTWD1Q8N5C7 304 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 SCLYQ96I15 445 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 PHPT1Q9NRX4 125 aaPredicted RBP16.16■□□□□ 0.18
TCOF1-206ENST00000445265 A0A1W2PRU2 124 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 TGFB1P01137 390 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 PDYNP01213 254 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 KELP23276 732 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 TPRG1LQ5T0D9 272 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 LIPJQ5W064 366 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 TNFAIP8L2Q6P589 184 aaPredicted RBP16.16■□□□□ 0.18
TCOF1-206ENST00000445265 ZBTB8BQ8NAP8 495 aaPredicted RBP16.16■□□□□ 0.18
TCOF1-206ENST00000445265 POLR2J2Q9GZM3 115 aaKnown RBP16.16■□□□□ 0.18
TCOF1-206ENST00000445265 SLITRK2Q9H156 845 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 PHF24Q9UPV7 400 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 GPSM3Q9Y4H4 160 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 HSPE1-MOB4S4R3N1 261 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 A0A0J9YVX5 310 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 SLC16A5O15375 505 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 AP1G1O43747 822 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 OXTRP30559 389 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 RAB25P57735 213 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 LETMD1Q6P1Q0 360 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 MBOAT1Q6ZNC8 495 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 Q6ZVU0 165 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 CMTM8Q8IZV2 173 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 CNIH3Q8TBE1 160 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 SLC30A3Q99726 388 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 TRIT1Q9H3H1 467 aaKnown RBP16.16■□□□□ 0.18
TCOF1-206ENST00000445265 ELAC1Q9H777 363 aaKnown RBP16.16■□□□□ 0.18
TCOF1-206ENST00000445265 ING3Q9NXR8 418 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 NCKAP1Q9Y2A7 1128 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 FAM240BA0A1B0GVZ2 78 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 ALDOCP09972 364 aaKnown RBP16.16■□□□□ 0.18
TCOF1-206ENST00000445265 BCAP31P51572 246 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 MTAPQ13126 283 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 GANABQ14697 944 aaKnown RBP16.16■□□□□ 0.18
TCOF1-206ENST00000445265 B4GALT6Q9UBX8 382 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 RNF6Q9Y252 685 aa16.16■□□□□ 0.18
TCOF1-206ENST00000445265 TRBC2A0A5B9 178 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 PPP6CO00743 305 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 PTPN2P17706 415 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 AFF1P51825 1210 aaKnown RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 CASP9P55211 416 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 RFKQ969G6 155 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 CXorf40BQ96DE9 158 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 OR2AG1Q9H205 316 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 RHBGQ9H310 441 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 CALML5Q9NZT1 146 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 SLC27A6Q9Y2P4 619 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 ARNTLO00327 626 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 ACOX3O15254 700 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 RETP07949 1114 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 AZGP1P25311 298 aaKnown RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 NUDT6P53370 316 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 VBP1P61758 197 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 SLC14A2Q15849 920 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 KLHL22Q53GT1 634 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 TUBA3EQ6PEY2 450 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 ENPP6Q6UWR7 440 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 CXXC5Q7LFL8 322 aaKnown RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 CARM1Q86X55 608 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 SLC35G5Q96KT7 338 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 C7orf72A4D263 438 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 SLC1A7O00341 560 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 MPC1LP0DKB6 136 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 TARDBPQ13148 414 aaKnown RBP eCLIP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 SLC36A3Q495N2 470 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 C10orf62Q5T681 223 aaPredicted RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 PLPP4Q5VZY2 271 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 MMP27Q9H306 513 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 TVP23BQ9NYZ1 205 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 SAP18O00422 153 aaKnown RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 ZW10O43264 779 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 LATS1O95835 1130 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 DGKGP49619 791 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF140P52738 457 aaPredicted RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 RGS8P57771 180 aaPredicted RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 GK3PQ14409 553 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 ZNHIT3Q15649 155 aaPredicted RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 BICRALQ6AI39 1079 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 KCNS3Q9BQ31 491 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 NPLQ9BXD5 320 aaPredicted RBP16.15■□□□□ 0.18
TCOF1-206ENST00000445265 INSL5Q9Y5Q6 135 aa16.15■□□□□ 0.18
TCOF1-206ENST00000445265 MROH6A6NGR9 719 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 OR1F1O43749 312 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 ARHGEF15O94989 841 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 CDK4P11802 303 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 RORCP51449 518 aa16.14■□□□□ 0.17
TCOF1-206ENST00000445265 MSANTD1Q6ZTZ1 278 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms