RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NKX2-1P43699 371 aaPredicted RBP4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 MTIF2P46199 727 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 GLIPR1P48060 266 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 IRX4P78413 519 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 IDI1Q13907 227 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 SLC36A3Q495N2 470 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 CFAP221Q4G0U5 840 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 CFAP157Q5JU67 520 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 ELFN2Q5R3F8 820 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 ARHGAP17Q68EM7 881 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 SUMO4Q6EEV6 95 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 KLC3Q6P597 504 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 PACS1Q6VY07 963 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 Q6ZSV7 163 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 TMEM26Q6ZUK4 368 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 GRAMD2AQ8IUY3 354 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 ZDHHC21Q8IVQ6 265 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 TRIM58Q8NG06 486 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 OR13C2Q8NGS9 318 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 SLC26A7Q8TE54 656 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 RNF128Q8TEB7 428 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 PPP4R1Q8TF05 950 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 TMEM174Q8WUU8 243 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 PSKH2Q96QS6 385 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 NTMT1Q9BV86 223 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 FICDQ9BVA6 458 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 TRPV6Q9H1D0 765 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 ACTL8Q9H568 366 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 ACTR8Q9H981 624 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 PCDH9Q9HC56 1237 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 TMEM184CQ9NVA4 438 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 PKD2L2Q9NZM6 624 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 CHRNA9Q9UGM1 479 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 MRPS7Q9Y2R9 242 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 TMED5Q9Y3A6 229 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 TMED3Q9Y3Q3 217 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 C2CD2Q9Y426 696 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 DDX49Q9Y6V7 483 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 PTPRCP08575 1304 aa4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 ATXN2Q99700 1313 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-202ENST00000443638 TMEM178BH3BS89 294 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 CASQ2O14958 399 aaPredicted RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 SCO2O43819 266 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 SNX3O60493 162 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 TBX19O60806 448 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 RNASEH1O60930 286 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ATP6V1G1O75348 118 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 CSO75390 466 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 MTX2O75431 263 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 NUDT17P0C025 328 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 STAG3L1P0CL83 205 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 KRT3P12035 628 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 MAGEA11P43364 429 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ATP5OP48047 213 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 TNFSF10P50591 281 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 PGGT1BP53609 377 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ZP1P60852 638 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 SSTP61278 116 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 FKBP1BP68106 108 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 CCZ1BP86790 482 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 CCZ1P86791 482 aaPredicted RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 HSF2Q03933 536 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ZNF415Q09FC8 603 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ANKRD55Q3KP44 614 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 CCDC152Q4G0S7 254 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ZC2HC1CQ53FD0 456 aaPredicted RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 SPDYCQ5MJ68 293 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 FAM159AQ6UWV7 190 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 PALB2Q86YC2 1186 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 MAP7D3Q8IWC1 876 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 PALM2Q8IXS6 379 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 MMD2Q8IY49 270 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ZNF34Q8IZ26 560 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 EIF1ADQ8N9N8 165 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 NEXN-AS1Q8NBZ9 246 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 LEMD2Q8NC56 503 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 OR13J1Q8NGT2 312 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 CCDC107Q8WV48 283 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 INPP5DQ92835 1189 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 SEMA4DQ92854 862 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 CNOT6LQ96LI5 555 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 FAM20AQ96MK3 541 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 SIGLEC11Q96RL6 698 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 SECISBP2Q96T21 854 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 MMTAG2Q9BU76 263 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 KLK15Q9H2R5 256 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 LRRC40Q9H9A6 602 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 NOX4Q9NPH5 578 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 TCP11L1Q9NUJ3 509 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ASB6Q9NWX5 421 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 C1RLQ9NZP8 487 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 ARPP21Q9UBL0 812 aaPredicted RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 TNNQ9UQP3 1299 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 CAB39Q9Y376 341 aaPredicted RBP4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 PAM16Q9Y3D7 125 aa4.92□□□□□ -1.62
TM9SF3-202ENST00000443638 DISP3Q9P2K9 1392 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 ZMYM2Q9UBW7 1377 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 TEX13DA0A0J9YY54 714 aaPredicted RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 MED19A0JLT2 244 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms