RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 C1QBP02746 253 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MAGEA11P43364 429 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 KIR3DL1P43629 444 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 ABRQ12979 859 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CDH18Q13634 790 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GTF2H2Q13888 395 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 EIF4HQ15056 248 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 LIPKQ5VXJ0 399 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PM20D1Q6GTS8 502 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GTF2H2CQ6P1K8 395 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CNIH2Q6PI25 160 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 NLGN1Q8N2Q7 840 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 OR10G2Q8NGC3 310 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GPR151Q8TDV0 419 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GTPBP3Q969Y2 492 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 ZNF436Q9C0F3 470 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 DPEP3Q9H4B8 488 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 ZNF33AQ06730 810 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SCRN3Q0VDG4 424 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 IL18Q14116 193 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 UGT8Q16880 541 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 FLYWCH1Q4VC44 716 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CYP4Z2PQ8N1L4 340 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CHST13Q8NET6 341 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 RNFT2Q96EX2 444 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 FEVQ99581 238 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 BARD1Q99728 777 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 DPH2Q9BQC3 489 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 PRDM8Q9NQV8 689 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GSTK1Q9Y2Q3 226 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SLC30A4O14863 429 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PAGE1O75459 146 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GPX5O75715 221 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 NAT2P11245 290 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 RPS19P39019 145 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 MAN2A2P49641 1150 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CDH12P55289 794 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 LETMD1Q6P1Q0 360 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 KRT74Q7RTS7 529 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PIAS4Q8N2W9 510 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 SPPL2AQ8TCT8 520 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GPR21Q99679 349 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MRPS7Q9Y2R9 242 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 USP2O75604 605 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 WDPCPO95876 746 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 ANXA3P12429 323 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MXD1Q05195 221 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 DUOXA1Q1HG43 343 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PDE12Q6L8Q7 609 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 ANKRD54Q6NXT1 300 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CYHR1Q6ZMK1 362 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CFAP77Q6ZQR2 320 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MOB2Q70IA6 237 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PHACTR4Q8IZ21 702 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 NPLOC4Q8TAT6 608 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PYCR2Q96C36 320 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SPON2Q9BUD6 331 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CARS2Q9HA77 564 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 RBFOX1Q9NWB1 397 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PDCD5O14737 125 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MOCS2O96007 188 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 TPOP07202 933 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 TAF12Q16514 161 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PTRHD1Q6GMV3 140 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 ASB18Q6ZVZ8 466 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CCDC117Q8IWD4 279 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 KLHL6Q8WZ60 621 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 LINGO1Q96FE5 620 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 OTUB1Q96FW1 271 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 PTTG3PQ9NZH4 202 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 TMEFF2Q9UIK5 374 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 PHRF1Q9P1Y6 1649 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 A0A0X1KG70 313 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 NUPL2O15504 423 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 AOC2O75106 756 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 RPP40O75818 363 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 KDM4BO94953 1096 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 APOL3O95236 402 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CKMT1AP12532 417 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PTX3P26022 381 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 ATP6V1E1P36543 226 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CDC73Q6P1J9 531 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 TMEM207Q6UWW9 146 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 RANBP10Q6VN20 620 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GPALPP1Q8IXQ4 340 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 C12orf66Q96MD2 445 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 B3GNT4Q9C0J1 378 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 LATS2Q9NRM7 1088 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 UBQLN1Q9UMX0 589 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 MAN2B2Q9Y2E5 1009 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PRAMEF33A0A0G2JMD5 474 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 A0A1W2PPL8 197 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 CLDN5O00501 218 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 PRAMEF10O60809 474 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 RGS4P49798 205 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 LILRB1Q8NHL6 650 aaPredicted RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 RNF170Q96K19 258 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms