RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 GBP5Q96PP8 586 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 PLCD4Q9BRC7 762 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 SGPP1Q9BX95 441 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 SPRTNQ9H040 489 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-210ENST00000441135 EPN3Q9H201 632 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 SLC6A20Q9NP91 592 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 ACSS2Q9NR19 701 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 TXLNGQ9NUQ3 528 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 ARL15Q9NXU5 204 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 TAC3Q9UHF0 121 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 NFU1Q9UMS0 254 aa17.44■□□□□ 0.38
SMPD4-210ENST00000441135 ANKRD12Q6UB98 2062 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 CCDC189A1A4V9 331 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 HCRTR1O43613 425 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 ZIC2O95409 532 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-210ENST00000441135 RHOXF2BP0C7M4 288 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 CRABP2P29373 138 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 PGGT1BP53609 377 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 ATP6V0D1P61421 351 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 TBPL1P62380 186 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 ZNF460Q14592 562 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 CDKL4Q5MAI5 379 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 ASB18Q6ZVZ8 466 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 TRMT10CQ7L0Y3 403 aaKnown RBP17.43■□□□□ 0.38
SMPD4-210ENST00000441135 PAQR7Q86WK9 346 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 RAB43Q86YS6 212 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 ZNF655Q8N720 491 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-210ENST00000441135 OR56A3Q8NH54 315 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 ANKRD49Q8WVL7 239 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 RHOXF2Q9BQY4 288 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 DPH7Q9BTV6 452 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 NDC1Q9BTX1 674 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 TRIM55Q9BYV6 548 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 ING2Q9H160 280 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 KLHL20Q9Y2M5 609 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 OARD1Q9Y530 152 aa17.43■□□□□ 0.38
SMPD4-210ENST00000441135 PCDHGA9Q9Y5G4 932 aaKnown RBP17.43■□□□□ 0.38
SMPD4-210ENST00000441135 MYO18BQ8IUG5 2567 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 ASH1LQ9NR48 2969 aaKnown RBP17.42■□□□□ 0.38
SMPD4-210ENST00000441135 IGKV1-8A0A0C4DH67 115 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 FITM1A5D6W6 292 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 ARGFXA6NJG6 315 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 CTSVO60911 334 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 DNAJB5O75953 348 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 EZRP15311 586 aaKnown RBP17.42■□□□□ 0.38
SMPD4-210ENST00000441135 TNFRSF8P28908 595 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 HNMTP50135 292 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 DCDP81605 110 aaKnown RBP17.42■□□□□ 0.38
SMPD4-210ENST00000441135 EFTUD2Q15029 972 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■■□□□ 14.4
SMPD4-210ENST00000441135 PRAMEF13Q5VWM6 474 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 CPZQ66K79 652 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 CAPN13Q6MZZ7 669 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-210ENST00000441135 LCTLQ6UWM7 567 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 PPFIBP2Q8ND30 876 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 SLC44A1Q8WWI5 657 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.42■□□□□ 0.38
SMPD4-210ENST00000441135 ZFYVE21Q9BQ24 234 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 HAUS8Q9BT25 410 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 ACAT2Q9BWD1 397 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 CAB39LQ9H9S4 337 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 CTNNAL1Q9UBT7 734 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 GPN3Q9UHW5 284 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-210ENST00000441135 IKZF3Q9UKT9 509 aa17.42■□□□□ 0.38
SMPD4-210ENST00000441135 FLNBO75369 2602 aaKnown RBP17.42■□□□□ 0.38
SMPD4-210ENST00000441135 A0A087WUV0 522 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-210ENST00000441135 NPEPPSL1A6NEC2 478 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 PHGDHO43175 533 aaKnown RBP17.41■□□□□ 0.38
SMPD4-210ENST00000441135 FAM155BO75949 473 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 ACSL3O95573 720 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 CCDC166P0CW27 439 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 NR1D1P20393 614 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 PGDP52209 483 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 ARSFP54793 590 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 EMP3P54852 163 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 RRADP55042 308 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 NAE1Q13564 534 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 GRM7Q14831 915 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 NKAIN1Q4KMZ8 207 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 THEMIS2Q5TEJ8 643 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 C1orf189Q5VU69 101 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 MBOAT1Q6ZNC8 495 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 TMEM102Q8N9M5 508 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-210ENST00000441135 TEX19Q8NA77 164 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 LRRN4CLQ8ND94 238 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 IP6K3Q96PC2 410 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 SELENOSQ9BQE4 189 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 SLC25A23Q9BV35 468 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 TMEM184CQ9NVA4 438 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 IFT80Q9P2H3 777 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-210ENST00000441135 DHCR7Q9UBM7 475 aaKnown RBP17.41■□□□□ 0.38
SMPD4-210ENST00000441135 NDOR1Q9UHB4 597 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 ZNF180Q9UJW8 692 aa17.41■□□□□ 0.38
SMPD4-210ENST00000441135 G3BP2Q9UN86 482 aaKnown RBP17.41■□□□□ 0.38
SMPD4-210ENST00000441135 UBR5O95071 2799 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-210ENST00000441135 ESPNB1AK53 854 aa17.4■□□□□ 0.38
SMPD4-210ENST00000441135 K7EM74 188 aa17.4■□□□□ 0.38
SMPD4-210ENST00000441135 CDC7O00311 574 aa17.4■□□□□ 0.38
SMPD4-210ENST00000441135 KLF7O75840 302 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-210ENST00000441135 CTSBP07858 339 aa17.4■□□□□ 0.38
SMPD4-210ENST00000441135 ANXA5P08758 320 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms