RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 VWA2Q5GFL6 755 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 GARNL3Q5VVW2 1013 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 UBE2R2Q712K3 238 aaPredicted RBP16■□□□□ 0.15
COL16A1-204ENST00000440437 CUZD1Q86UP6 607 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 AMER3Q8N944 861 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 PPP4R1Q8TF05 950 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 SLCO2A1Q92959 643 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 WDR77Q9BQA1 342 aaPredicted RBP16■□□□□ 0.15
COL16A1-204ENST00000440437 LHPPQ9H008 270 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 ILKAPQ9H0C8 392 aaPredicted RBP16■□□□□ 0.15
COL16A1-204ENST00000440437 KCNF1Q9H3M0 494 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 IARS2Q9NSE4 1012 aaKnown RBP16■□□□□ 0.15
COL16A1-204ENST00000440437 ASF1BQ9NVP2 202 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 UTP6Q9NYH9 597 aaKnown RBP16■□□□□ 0.15
COL16A1-204ENST00000440437 MAP10Q9P2G4 905 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 PCDHGA10Q9Y5H3 936 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 UTP20O75691 2785 aaKnown RBP16■□□□□ 0.15
COL16A1-204ENST00000440437 NAV2Q8IVL1 2488 aa16■□□□□ 0.15
COL16A1-204ENST00000440437 A0A1W2PQ72 361 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 P2RX6O15547 441 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 FOXS1O43638 330 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 SEMA7AO75326 666 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 BANF1O75531 89 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 HPP00738 406 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 SLC26A3P40879 764 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 DHX9Q08211 1270 aaKnown RBP15.99■□□□□ 0.15
COL16A1-204ENST00000440437 PTK6Q13882 451 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 PPP1R7Q15435 360 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 ATG9BQ674R7 924 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 LAPTM4BQ86VI4 370 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 PARP9Q8IXQ6 854 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 PRSS58Q8IYP2 241 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 CISD2Q8N5K1 135 aaKnown RBP15.99■□□□□ 0.15
COL16A1-204ENST00000440437 VPS50Q96JG6 964 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 BARD1Q99728 777 aaKnown RBP15.99■□□□□ 0.15
COL16A1-204ENST00000440437 DDX47Q9H0S4 455 aaKnown RBP15.99■□□□□ 0.15
COL16A1-204ENST00000440437 C3orf18Q9UK00 162 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 CDC14AQ9UNH5 594 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 NTNG1Q9Y2I2 539 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 ICE1Q9Y2F5 2266 aa15.99■□□□□ 0.15
COL16A1-204ENST00000440437 SPTAN1Q13813 2472 aaKnown RBP15.99■□□□□ 0.15
COL16A1-204ENST00000440437 MAP2K7O14733 419 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 FFAR3O14843 346 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 GPR42O15529 346 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 PRPF4O43172 522 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 ZSCAN12O43309 604 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 TTC4O95801 387 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 RNF224P0DH78 156 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 ACPPP15309 386 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 IVDP26440 423 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 GABRB3P28472 473 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 TBPL1P62380 186 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 SNRPNP63162 240 aaKnown RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 NR6A1Q15406 480 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 HIF1AQ16665 826 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 EIF2S3LQ2VIR3 472 aaKnown RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 MSS51Q4VC12 460 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 RBM20Q5T481 1227 aaKnown RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 AGAP7PQ5VUJ5 663 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 LRRC8EQ6NSJ5 796 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 PLD3Q8IV08 490 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 CNTN4Q8IWV2 1026 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 SSC4DQ8WTU2 575 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 RERGQ96A58 199 aaPredicted RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 C8orf44Q96CB5 159 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 THOC3Q96J01 351 aaKnown RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 AGAP4Q96P64 663 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 NDNQ99608 321 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 EBNA1BP2Q99848 306 aaKnown RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 TGIF2Q9GZN2 237 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 PLAC1Q9HBJ0 212 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 LRRC4CQ9HCJ2 640 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 CCDC177Q9NQR7 707 aaPredicted RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 ABCF3Q9NUQ8 709 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 C14orf105Q9NVL8 296 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 TRPC4Q9UBN4 977 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 ASIC3Q9UHC3 531 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 TRMT6Q9UJA5 497 aaKnown RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 ADAMTS6Q9UKP5 1117 aa15.98■□□□□ 0.15
COL16A1-204ENST00000440437 NOVA2Q9UNW9 492 aaKnown RBP15.98■□□□□ 0.15
COL16A1-204ENST00000440437 IDSB3KWA1 339 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 H7BY64 318 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 TXNDC9O14530 226 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 CBX6O95503 412 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 COX6A1P12074 109 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 SP140Q13342 867 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 FAM53BQ14153 422 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 SPANXN3Q5MJ09 141 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 THEMIS2Q5TEJ8 643 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 IRAK1BP1Q5VVH5 260 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 UGT3A1Q6NUS8 523 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 ADCK2Q7Z695 626 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 GALNT7Q86SF2 657 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 EEF1AKMT1Q8WVE0 214 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 MMABQ96EY8 250 aaPredicted RBP15.97■□□□□ 0.15
COL16A1-204ENST00000440437 PRAP1Q96NZ9 151 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 DRC3Q9H069 523 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 GRPEL1Q9HAV7 217 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 ZNF160Q9HCG1 818 aa15.97■□□□□ 0.15
COL16A1-204ENST00000440437 MKKSQ9NPJ1 570 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms