RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ADCK2Q7Z695 626 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 THOC6Q86W42 341 aaKnown RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 TTC29Q8NA56 475 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 PDPRQ8NCN5 879 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 ABHD11Q8NFV4 315 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 KCTD4Q8WVF5 259 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 UBLCP1Q8WVY7 318 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 MR1Q95460 341 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 NXNL1Q96CM4 212 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 SLC45A3Q96JT2 553 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CABS1Q96KC9 395 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 PRAP1Q96NZ9 151 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 OR4K3Q96R72 315 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 C17orf62Q9BQA9 187 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 GPR87Q9BY21 358 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 VPS11Q9H270 941 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 ALG9Q9H6U8 611 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CNOT10Q9H9A5 744 aaKnown RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 TXLNGQ9NUQ3 528 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 NUDT4Q9NZJ9 180 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CD274Q9NZQ7 290 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CROTQ9UKG9 612 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 DYRK1BQ9Y463 629 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 PCDHGA6Q9Y5G7 932 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 KCNE2Q9Y6J6 123 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 KMT2BQ9UMN6 2715 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CFAP47Q6ZTR5 3102 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 EPG5Q9HCE0 2579 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 LOC105369274A0A096LPK9 316 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 LOC102723532A0A0G2JNH3 316 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 IQANK1A0A1B0GTG1 560 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 NCF1BA6NI72 391 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 ZNF891A8MT65 544 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 NCF1CA8MVU1 366 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 TRIM49D1C9J1S8 452 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 H0YGG7 62 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 TXNDC9O14530 226 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 HAT1O14929 419 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 NRP2O60462 931 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 RECKO95980 971 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 TUBBP07437 444 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 RAB40ALP0C0E4 278 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 CDH1P12830 882 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 NCF1P14598 390 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 TCN2P20062 427 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 GRK3P35626 688 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 VSX2P58304 361 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 ARF3P61204 181 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 CSNK1G2P78368 415 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 IRF9Q00978 393 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 MC1RQ01726 317 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 SRSF6Q13247 344 aaKnown RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 DNASE1L3Q13609 305 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 TSNAXIP1Q2TAA8 658 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 WASHC2DQ5SRD0 308 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 ZNF385CQ66K41 422 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 EMBQ6PCB8 327 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 GPR155Q7Z3F1 870 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 OR4N4Q8N0Y3 316 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 OR4K1Q8NGD4 311 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 CT55Q8WUE5 264 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 SLC5A11Q8WWX8 675 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 RERGQ96A58 199 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 RNF31Q96EP0 1072 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 GPR78Q96P69 363 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 GBP5Q96PP8 586 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 OR2A5Q96R48 311 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 ATOH8Q96SQ7 321 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 SARGQ9BW04 601 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 CAPS2Q9BXY5 557 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 CPNE5Q9HCH3 593 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 WWOXQ9NZC7 414 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 PSMC3IPQ9P2W1 217 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 PTBP2Q9UKA9 531 aaKnown RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 SH2B3Q9UQQ2 575 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 SLC22A14Q9Y267 594 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 PCDHGA4Q9Y5G9 962 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 SNRNP200O75643 2136 aaKnown RBP11.3□□□□□ -0.6
HSPG2-206ENST00000439717 PCM1Q15154 2024 aa11.3□□□□□ -0.6
HSPG2-206ENST00000439717 A0A1B0GX78 115 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 HYKKA2RU49 373 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 DSCR3O14972 297 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 TAPBPO15533 448 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 STK16O75716 305 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 WDR47O94967 919 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 ONECUT2O95948 504 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 EIF2S1P05198 315 aaKnown RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 CD63P08962 238 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 RBP1P09455 135 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 PIM1P11309 404 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 GNAZP19086 355 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 WT1P19544 449 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 GMPRP36959 345 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 KCNC1P48547 511 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 RPS15P62841 145 aaKnown RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 DCDP81605 110 aaKnown RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 RASA2Q15283 850 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms