RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 EQTNQ9NQ60 294 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 C5AR2Q9P296 337 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLC24A2Q9UI40 661 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 RPS6KL1Q9Y6S9 549 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 SMCHD1A6NHR9 2005 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 LAMB2P55268 1798 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 NCOR1O75376 2440 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 EDDM13A0A1B0GTR0 161 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 PCDH7O60245 1069 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 MED24O75448 989 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 CSPG5O95196 566 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 NR3C1P04150 777 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 INHBAP08476 426 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 PTPN3P26045 913 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 THOP1P52888 689 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 HNRNPKP61978 463 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 RPS18P62269 152 aaKnown RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 PNRC1Q12796 327 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 WDR38Q5JTN6 314 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 KRT39Q6A163 491 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 CORO6Q6QEF8 472 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZBTB49Q6ZSB9 765 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 KRT74Q7RTS7 529 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 CENPVQ7Z7K6 275 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 COMMD2Q86X83 199 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 CEP57L1Q8IYX8 460 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 L3MBTL4Q8NA19 623 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 TDRD5Q8NAT2 981 aaKnown RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 OR10V1Q8NGI7 309 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 EXD1Q8NHP7 514 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 SNRNP27Q8WVK2 155 aaKnown RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 TMEM190Q8WZ59 177 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 SPDL1Q96EA4 605 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 BAG1Q99933 345 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 AP1M1Q9BXS5 423 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 OR10A4Q9H209 315 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 TFB2MQ9H5Q4 396 aaKnown RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 APOBEC3GQ9HC16 384 aaKnown RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 ACKR4Q9NPB9 350 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 OLFML3Q9NRN5 406 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 DDX43Q9NXZ2 648 aaKnown RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 DPP3Q9NY33 737 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 DDX25Q9UHL0 483 aaKnown RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 RNF150Q9ULK6 438 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 PADI2Q9Y2J8 665 aa3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 KMT2BQ9UMN6 2715 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P12-201ENST00000438745 ALPK3Q96L96 1907 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 RTL9Q8NET4 1388 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 ABCC12Q96J65 1359 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 A0A1W2PPI3 338 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 TCRBV21S2A2A0A5A6 115 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 FEZF1A0PJY2 475 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 OR6C76A6NM76 312 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 PLOD2O00469 737 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 DKC1O60832 514 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 TBX10O75333 385 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 PDE9AO76083 593 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 OR2T7P0C7T2 308 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 PATE4P0C8F1 98 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 SMIM18P0DKX4 95 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 ERVK-10P10266 1014 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 GNAZP19086 355 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 MSH3P20585 1137 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF75DP51815 510 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 HSPB3Q12988 150 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 KIR2DS3Q14952 304 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 NR1D2Q14995 579 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 C14orf177Q52M58 125 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 KLHL26Q53HC5 615 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 MDH1BQ5I0G3 518 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 KRBOX4Q5JUW0 171 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 GRTP1Q5TC63 336 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 KRT80Q6KB66 452 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 NOTCH2NLQ7Z3S9 236 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 ARHGAP24Q8N264 748 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 Q8NFD4 153 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF473Q8WTR7 871 aaKnown RBP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 STAMBPL1Q96FJ0 436 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 SFXN2Q96NB2 322 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF558Q96NG5 402 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 FSD1Q9BTV5 496 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 LMF2Q9BU23 707 aaKnown RBP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 TEX13AQ9BXU3 409 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 BARHL1Q9BZE3 327 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 UPF3BQ9BZI7 483 aaKnown RBP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 GPR88Q9GZN0 384 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 DEFB129Q9H1M3 183 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 S1PR5Q9H228 398 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 ST6GALNAC4Q9H4F1 302 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 BICC1Q9H694 974 aaKnown RBP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 NOL11Q9H8H0 719 aaKnown RBP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZCCHC17Q9NP64 241 aaKnown RBP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 PRMT7Q9NVM4 692 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 GIMAP2Q9UG22 337 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 TUBE1Q9UJT0 475 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 GPR179Q6PRD1 2367 aa3.03□□□□□ -1.92
HMGB3P12-201ENST00000438745 LRRC37A2A6NM11 1700 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ABCC4O15439 1325 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 A0A1W2PPM1 405 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms